CI01000046_02933552_02949246


Basic Information

Item Value
gene id CI01000046_02933552_02949246
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 2933487 ~ 2949318 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_02933552_02949246.mRNA
CTATAAATCCAGCCATGAACTACACTACCACACTATAAACTTCAGACTTTTGTATACAGCCATCCATGGATATAATTGAGAGGCCACTTTATTCCCCTCATCATTGCCATAATTATACCATTTATATGGCAATCAGGGAGGCCGGTTGTATGGGACGGGAGAATTGGCTTGTTCATAAGCAAGTTTTACAGGCACCACTGCTGGCACTTATCCTTGTGACTGCTGCCATGTGCGTGTCCACGTGTGTGATGATAGTGATGAAAGCATCACCCCTCCTCCTCAACAAACCCACTGCTCTGACGCATGTATCTGTTTTTAATTCGCATCCACGCAACCTGCTGCAAGCTGCGCATGAAGATGGCCCAAGACTCCATCTGCGTTGGCGTGTGGAGGTTTGTGAGAGGACTGTGCGAATTAGTATTTCCTGTGCAGAAATAGAAAGGAAATTATCCTCTGTAGAAGAGAAATTCGATGTTAGGCTTATCTTGGATATCCTGCAGTATTACCTCACATGTAACGTGGGTCAGGTCAACCCCTTCCAACAGAAGCTGTCAGGAAGTCACAAAGCACTGGTGGAAATGCAGGATGACGTGTCCGAACTACTGCGCTCTGCAGTCCGAGAATACCCCAAAACAAAGGAAAACCTTGAGCAGATTCAGGGGGGGTTGAACACCACTGAGGTTGGACTGCACCAGCTCACTGCCCTTGTGGACTGCCGCAGTTTGCACATGGATTATGTGCAGGCATTGACCGGCGTGTGTTATGATGGGCTGGAGGGTCTGATCTACCTGGTGCTGTTCTCATTCATCACAGCTCTCATGTTCACCTCTGTCGTCTGCAGCGTGCCGCACACATGGCATGGCAAAAGGCCTGATGAGGACGGTGAGGAGGAGTCCATGGCTCCTGGAGGCAGACAGAATCATGATAACCTGTACCGAGTGCACATGCCCAGCCTCTACAGCTGCGGCAGCAGCTACGGCAGCGAGACCAGCATCCCTGCAGGAGCGCACACCGTCAGCAACGCTCCCGTTACCGAGTACATGAAACAGACTGCTGGAGGAGTGATAGGGGAACAGGGTGTAGCAGGGGGCTCAGAGAGGGATATTGGGGGTACCTGTCAGAATGTCATGGGTGAAAAAGTGGCAAAAATCACCTAAAAACACAAGACAAGCAGTACTGTTCAGGAAGAGAGAAAATGTTATGTAATCTATAAAACCCCTTTATTTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_02933552_02949246.mRNA True 1229 mRNA 0.49 8 2933487 2949318

Neighbor

gene id symbol gene type direction distance location
CI01000046_02911888_02930362 NA coding upstream 2494 2911145 ~ 2930993 (+)
CI01000046_02868880_02871348 NUDT1, 8ODP coding upstream 61876 2868880 ~ 2871611 (+)
CI01000046_02794245_02796188 NA coding upstream 136399 2793879 ~ 2797088 (+)
CI01000046_02674254_02676647 ELFN1, ELFN1A coding upstream 256686 2674060 ~ 2676801 (+)
CI01000046_02616123_02661535 NA coding upstream 271523 2616047 ~ 2661964 (+)
CI01000046_02981176_03006650 NA coding downstream 31509 2980827 ~ 3006675 (+)
CI01000046_03041320_03042564 GRIFIN coding downstream 92002 3041320 ~ 3042750 (+)
CI01000046_03046400_03047689 NA coding downstream 96461 3045779 ~ 3048432 (+)
CI01000046_03138487_03139142 NA coding downstream 189169 3138487 ~ 3140879 (+)
CI01000046_03205894_03253907 NA coding downstream 256274 3205592 ~ 3254330 (+)
G196698 NA non-coding upstream 60026 2794370 ~ 2873461 (+)
G196703 NA non-coding upstream 141275 2791961 ~ 2792212 (+)
G196691 NA non-coding upstream 157827 2775371 ~ 2775660 (+)
G196687 NA non-coding upstream 168245 2764868 ~ 2765242 (+)
G196123 NA non-coding upstream 183521 2649288 ~ 2749966 (+)
G196749 NA non-coding downstream 16870 2966188 ~ 2966536 (+)
G196754 NA non-coding downstream 32260 2981578 ~ 2981812 (+)
G196757 NA non-coding downstream 40846 2990164 ~ 2990436 (+)
G196773 NA non-coding downstream 67147 3016465 ~ 3016713 (+)
G196780 NA non-coding downstream 73841 3023159 ~ 3023393 (+)
CI01000046_02451052_02454565 MAFK other upstream 476207 2442395 ~ 2457280 (+)
CI01000046_01865451_01881353 NA other upstream 974339 1865451 ~ 1881369 (+)
CI01000046_01540075_01668012 HS3ST4 other upstream 1370150 1539494 ~ 1668012 (+)
G195003 NA other upstream 1771797 1161157 ~ 1161690 (+)
G194721 NA other upstream 2473142 458008 ~ 460345 (+)
G196936 NA other downstream 237677 3186995 ~ 3194271 (+)
CI01000046_03943890_03945302 ATP5J2 other downstream 994510 3943794 ~ 3945500 (+)
G197055 NA other downstream 1200105 4149423 ~ 4149780 (+)
G197121 NA other downstream 1421693 4371011 ~ 4371430 (+)
G196869 NA other downstream 1466212 4415530 ~ 4421687 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location