CI01000046_03046400_03047689


Basic Information

Item Value
gene id CI01000046_03046400_03047689
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 3045779 ~ 3048432 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_03046400_03047689.mRNA
CTATTAAAAGACAGACTTATTTCTGATACTTATTATTAATGTTCCTGTGCTGAGAGTTCATTTTAATTATTTCCAAAGAACAATTACTCAATGCTTGTTTTCTCTAATGGTTTTGTTGGATGGTATAACAAATACCTAGCTCAAAATGAGATTCATTTTTGCAAAATTGTGTCCTTAAGTAACATCACACAACATCAAATACTATTTGTTCTGGTTAAGCAGCTGATTTATTGTACCAGCGACTTATTGTGGTTTGCATAATTCACATCTTGCCTGACAAAAGAGAAGATTGTAAAGAAAATGTAATATTAAAAGAGAGAGTTATTTGTGAAATCTTTTATTGATCAGGTGGTAGATTTTAAGGCTTACAGTTAAGTCAGTGCAATTGCTTGGATTTCTTGTTATCTCTTAATTGAATTTCCCTCCTAATGTGTGTCGTGTTTCCGTAGATGGCAGTTGGCTAAATGATGGATTTCATTACCTTACTCGTTTTGGCTGAAGATGAAGATGACTTAAGCTTTAGTAATCGACTCTGGAATGTCTGAAGCAGCCTTTGGATTCCAACTACTGCATATCAAAACACCACATATCTCCTGAACCTTTAAGAGACACAAAAGGAATATGAATTTCACTGCAGGCTTGCTGAAAAATGAGCCTCTGCTCTTAAACACCTTGCTGTCCTTGAATGCCTCTTTCCACGGTGCCGAGGACTTCATGAGCGATGTTTTCCTCCATCAGAGTGGAGAGCTGGAGAGGCTGCTGCTGCTGACGATCAAAGAGCCCACCACCATCGCTCTCACGGTGATGTATTCGTTATCATTTGTGGTGGGATTCATTGGAAATCTCATGGCTATTCGAATGCTTACCTGCCAGAAGAGTAAGAGGATGCAGAGCATCAGTGCCACCCGGAGTTTACTCATCAACTTGGCAGTGTGTGATCTGATGGTGGTTTGCATCTGCATGCCCATCACCCTCGGCCACACCATTTATACCGCATGGGTGTACGGAGACCTCCTGTGCCGGGCCGTTCCCTTCATCCAGGCCGTGTCCGTGTCGGCCAGCGTCCTCAGCCTGACCGTCATCAGCGTCAACAGATACTACAGTGTTCACAGCCCTCTGAATTCCCTCTCGTACTTCACCCAGAAGAAGATCTACATCACCATTGTGTGCGTGTGGGTCTTGTCCTCTGCCATTTGTGCGCCTTTGCTCTTCATGATCAAGCTGGACAAGATCCACTTGATCGACATCACCGTGCCAATCTGCAGAGAGCTGTGGCCACAGGCTAGACTCAAGCAGGTCTACAACGTGCTCCTTTTCGTGGCTCTCTACTGCATCCCTGTGACCTTTAACCTCATCATCAGCTTCCTGACTGGCCGGAAGCTCTGGAGGGCTTCTCAACATTTCGCAGACTTCGATCCACACAGCCAGGCCTTGCACGCCTCACGTTTGAAGATGCGCAAGAAGATCGCCAAGGTGGTGGTCACTTTGGTCCTCCTGTTCGCCGGCTCCTGGCTCCCACTCTACGTAGCAGACATCCTCATTGACCGCGAGGTTCATCCCCCTAACTGGGTTCTGCATACTCGCCCTTTCGCGCAGTGGTTGGGCCTCACTAACTCCAGCCTCAATCCCATCTGCTATTGTTTCTTGGGTGATTTGTACCGTTCTGCCAGAGCAGTCAGGTCCAAGTATCATCAGAGGATGCTCTCCGTCCTTAGATCCTCCAGCTCTTTTAAACTGTCCAGTTTGCTCTCTCTCAAAAAGCAGAAATCTGGCCGGCAACAAGGCGCCGTGAGCCAGGTGTCAGTGGAGACTCTTTCTGATTGGTGTTCCAACAACAGCCAGATGGTGTCTCTCCATAGCCTCTCAGAGAAGATCATGTCTACAAGCAATCTTGAGTTATCGAACTTGTAGTCAGGGCGCATATTACCTGAAAGGACACGGCACTTAAAGGGATAGTTTACCCAAAAACAGCTTCTTTTGTGTTCCACAAGAGAAAGAAAGTCATACAGTTTTCGTAACACCATGAGGGTGAGTAAATAATGACAGAATTTTCATTTTTGGGTGGCCTATCTCTTTACGTTTTATTGTACTACTGTCAAAAAGCATGTGATTCTGATGATTTGATGCAACATCAGCATAATTTGTGTTCATAACTGACCATCTACAGTTACATTGCATCTTGACCAGTGTTGGGGAAAGTTACTTTTATAAGTAATGCATTACAATATTGTGTTACTCCCTTAAAAAAAGTAACTAATTGCATTACTTAGTTACTTTTTATGAAAAGTAATGCGTTACATTACTTTTGCATTACTTTTTCTCACCTGAACTGGGTTTGCTGAATGTTTTCGTGCAAGTGAGATGAGTTCACATTTAGTCTAGAACTACATTAAGCATCACGTTTACACAGCGCACGCAACGTCTCTGCACTACCCTGTTTATCTCAACATGGGGACAGGAGAGCTGTCAGATAATAAATGTGAAAACAAAGTAACTTAAGTTACTTACTTGAAAAAGTAACTTAGATATTTTGCTGTAAATTGAAAAAAGTTTTGCGTGACTTTACTAGTTACTTGAAAAAGTAATCTGATTACATAACTCAAGTTACTTGTAATGTGTTACCCCCAACACTGATCATCATACACGGTACATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_03046400_03047689.mRNA True 2654 mRNA 0.43 1 3045779 3048432

Neighbor

gene id symbol gene type direction distance location
CI01000046_03041320_03042564 GRIFIN coding upstream 3029 3041320 ~ 3042750 (+)
CI01000046_02981176_03006650 NA coding upstream 39104 2980827 ~ 3006675 (+)
CI01000046_02933552_02949246 NA coding upstream 96461 2933487 ~ 2949318 (+)
CI01000046_02911888_02930362 NA coding upstream 114786 2911145 ~ 2930993 (+)
CI01000046_02868880_02871348 NUDT1, 8ODP coding upstream 174168 2868880 ~ 2871611 (+)
CI01000046_03138487_03139142 NA coding downstream 90055 3138487 ~ 3140879 (+)
CI01000046_03205894_03253907 NA coding downstream 157160 3205592 ~ 3254330 (+)
CI01000046_03347042_03438271 SDK1, SDK1A coding downstream 298610 3347042 ~ 3438271 (+)
CI01000046_03443490_03508344 SDK1, SDK1A coding downstream 394845 3443277 ~ 3508481 (+)
CI01000046_03511698_03542614 SDK1, SDK1A coding downstream 462973 3511405 ~ 3542844 (+)
G196809 NA non-coding upstream 2297 3043191 ~ 3043482 (+)
G196780 NA non-coding upstream 22386 3023159 ~ 3023393 (+)
G196773 NA non-coding upstream 29066 3016465 ~ 3016713 (+)
G196757 NA non-coding upstream 55343 2990164 ~ 2990436 (+)
G196754 NA non-coding upstream 63967 2981578 ~ 2981812 (+)
G196784 NA non-coding downstream 34501 3082933 ~ 3084120 (+)
G196975 NA non-coding downstream 514065 3562497 ~ 3563548 (+)
G196885 NA non-coding downstream 574280 3622712 ~ 3642563 (+)
CI01000046_02451052_02454565 MAFK other upstream 588499 2442395 ~ 2457280 (+)
CI01000046_01865451_01881353 NA other upstream 1086631 1865451 ~ 1881369 (+)
CI01000046_01540075_01668012 HS3ST4 other upstream 1482442 1539494 ~ 1668012 (+)
G195003 NA other upstream 1884089 1161157 ~ 1161690 (+)
G194721 NA other upstream 2585434 458008 ~ 460345 (+)
G196936 NA other downstream 138563 3186995 ~ 3194271 (+)
CI01000046_03943890_03945302 ATP5J2 other downstream 895396 3943794 ~ 3945500 (+)
G197055 NA other downstream 1100991 4149423 ~ 4149780 (+)
G197121 NA other downstream 1322579 4371011 ~ 4371430 (+)
G196869 NA other downstream 1367098 4415530 ~ 4421687 (+)

Expression


Co-expression Network