CI01000046_03712603_03713730


Basic Information

Item Value
gene id CI01000046_03712603_03713730
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 3712472 ~ 3714191 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_03712603_03713730.mRNA
CTATTAATATATTCTGTATAATGGAAATCTCAGGTAATTCTGAAGTCTGGAACACATTTTATTTTATTGCAATGCTCCTTAAACAATTAAAATGAACCGAGGAATGAAGTGAAGCTGTTTTTTTCTTCACAATGGAATCAGATGATCCACTTGGTGTGAGGAATCAGGTGAACATCTCAGCTGCTTTTGCCAACATATCACCAACAATAGCAGGACCCGACCGGCACGCGCCCGCGTCCTCTTACGATATGCTAATAACATCCATACTCGGCACAATTTTGACCCTAATGTGTTTGGTTGGCGTTGTTGGAAACGTTTACACTCTGGTCATTATGAACACCTCTGTGCGCGTAACTGGATCGATGTATGTCTACATTGTGAACTTGGCTCTGGCGGATCTGTTGTACCTCTCCACCATCCCGTTCGTGGTTTGGACGTATTTTGCAAAGGACTGGTACTTTGGCGACATCGGGTGCCGCGTCCTGTTCAGCCTGGATTTCGTCACCATGCACGCGAGCATCTTCATCTTGACCGTCATGTGCACGGAGCGCTATATGGCTGTCGTGAACCCGCTAGACACCTTCGGCCGGTCCCAGCGCTACAGGCGCGCGGTCACCTGCCTCGTGTGGCTCTTTTCCTTCATCCTGGCTCTACCGACCATGATCATGATCGACCTCAAGAAAGACGTGCACAATGGAGTAGAGAAGCGCATGTGCCACCCGACCTGGCAGATGACCGCGTACAGGGTGTATCTGACCGTTCTGTTCAACACCTGCATCTTGGCTCCTGGATTAATCATCGGGTATCTCTACCTGAAGTTAGCCCGCACCTACTGGCTATCGCAAACCTCTGTATTCCCATCCAGAGACATGAAGAAGTGTCCTAAGCAAAAGGTGTTATATATGATCTTCAGTATAGTTCTGACCTATTGGGCGTGTTTCTTGCCCTTCTGGTTGTGGCAGTTGATAAGTATCTATTACTACGCGCACGGGAAGCTCTCGAGCAGCACGGTGGTGTACATTAACTTTGTTGTGACTTGTTTGGCGTACAGTAACAGTTGTATCAACCCTTTCTTGTACACTTTATTAACGAGGAATTATCAGGAATATGTGAGAGAAAGACAAAAAAGCAGCACAGAGTTTAAGAAGAGGTTCAGACTGTCATCTCAAAGGTCTGTGTCTTCTGGGAGTCAACAGTTCTCGAATACTTTGACTAATACGCATCCTAATGGCATTCTGGATGCTTATAGCAAATTGTGAGAATATTTCTTAGTGTGGTGAAAGGAAGGACTCATTTTCCCCTACGTTTACTTACATAACCAAACAGACGAACATCAACCACAGATAACTACAGCAAGATACAATGTTTTGTATATAATGTATGTTTGAATCTATACAAACAAAAATAATATCAGTATCAATTATTCTTATATCTAAAAAAACACAACAACAACAACAACAACAAGAAAAAAAAAAAAAAATAGAAAAAAAAAAACCATCTTCCTGGCTACAGCCCTGTCCTAAGGTTTCCAGAACATTGTAGTAATGTTGGTTTTTGGTTCTCAGAACGTTTTCATTCAGAACATACATTTTTAAAATCTCCCCCAAAATCTTAAAACATGCATTAGCTAGGAAAGCTTTCTTTAAATATATAGAATGATTTTTTGTTCTAAAATAATTATAAGGGAACGTTCTGTAAATGTTATTTTATGGTTGTAAAA

Function

NR:

description
urotensin II receptor

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K04241 UTS2R; urotensin 2 receptor

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_03712603_03713730.mRNA True 1720 mRNA 0.42 1 3712472 3714191

Neighbor

gene id symbol gene type direction distance location
CI01000046_03680288_03699097 SMURF1 coding upstream 13375 3680288 ~ 3699097 (+)
CI01000046_03624314_03633087 WIPI2 coding upstream 79271 3624314 ~ 3633201 (+)
CI01000046_03596032_03605678 AP5Z1 coding upstream 106626 3595468 ~ 3605846 (+)
CI01000046_03572743_03591418 FOXK1 coding upstream 121019 3570743 ~ 3591453 (+)
CI01000046_03556534_03559710 CYP3C1, CYP3C2, CYP3C3, CYP3C4 coding upstream 152635 3556206 ~ 3559837 (+)
CI01000046_03721265_03754551 RNF216 coding downstream 6491 3720682 ~ 3754781 (+)
CI01000046_03794654_03799486 ACTG1, ACTL9, ACTB2, ACTB1, ACTB, ACTBB coding downstream 79529 3793720 ~ 3800026 (+)
CI01000046_03887074_03887701 NA coding downstream 172719 3886910 ~ 3888039 (+)
CI01000046_03943890_03945302 ATP5J2 coding downstream 229603 3943794 ~ 3945500 (+)
CI01000046_03953528_03957334 PDAP1B, PDAP1 coding downstream 238914 3953105 ~ 3957695 (+)
G196846 NA non-coding upstream 67774 3644183 ~ 3644698 (+)
G196885 NA non-coding upstream 69909 3622712 ~ 3642563 (+)
G196857 NA non-coding upstream 71202 3638909 ~ 3641270 (+)
G196975 NA non-coding upstream 148924 3562497 ~ 3563548 (+)
CI01000046_03205894_03253907 NA non-coding upstream 473136 3205592 ~ 3254330 (+)
G196994 NA non-coding downstream 57651 3771842 ~ 3772078 (+)
G196887 NA non-coding downstream 176829 3891020 ~ 3891841 (+)
G197024 NA non-coding downstream 200393 3914584 ~ 3914837 (+)
G197039 NA non-coding downstream 236394 3950585 ~ 3950828 (+)
G196871 NA non-coding downstream 411807 4125998 ~ 4126444 (+)
G196936 NA other upstream 518201 3186995 ~ 3194271 (+)
CI01000046_02451052_02454565 MAFK other upstream 1255192 2442395 ~ 2457280 (+)
CI01000046_01865451_01881353 NA other upstream 1753324 1865451 ~ 1881369 (+)
CI01000046_01540075_01668012 HS3ST4 other upstream 2149135 1539494 ~ 1668012 (+)
G195003 NA other upstream 2550782 1161157 ~ 1161690 (+)
G197055 NA other downstream 435232 4149423 ~ 4149780 (+)
G197121 NA other downstream 656820 4371011 ~ 4371430 (+)
G196869 NA other downstream 701339 4415530 ~ 4421687 (+)
G197352 NA other downstream 1560191 5259318 ~ 5276453 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_026669 uts2r5 coding NC_007114.7 CM002887.2 40679931 ~ 40681001 (-)