CI01000046_04081845_04083512


Basic Information

Item Value
gene id CI01000046_04081845_04083512
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 4081721 ~ 4083535 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_04081845_04083512.mRNA
ATACAAAAGAAACTGGAGCTTGCATGAAGGATCACATTGTTTCTCTGCACCGATTCACGCCTAACGGAATTTCTATCAATCTGAGACGGTGCAGGCTGTGATATATCACTGATTCGGCTTCAGGATGATGAAGTTTAGGTTCAGACGGCAGGGAAATGACCCTCATCGTGAGAAAATCAAGCAGGATCTATTTGCATTCAATAAGACAGTTGAACATGGATTCCCAAACCAGCCAAGTGCTTTGGCCTATGATCCCAAACTGCAGCTTATGGCCATTGGAACTAAATCAGGGGCCATCAAAATGTATCCTTTTGTTAGCGCTTTACTGCCATGGAATTAATGATATAGGATCACTTTTTGTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_04081845_04083512.mRNA True 363 mRNA 0.42 2 4081721 4083535

Neighbor

gene id symbol gene type direction distance location
CI01000046_04040958_04080846 NA coding upstream 402 4040023 ~ 4081319 (+)
CI01000046_04024795_04028000 DRG2 coding upstream 53721 4024551 ~ 4028000 (+)
CI01000046_03998572_04009276 ZNF598 coding upstream 71505 3998572 ~ 4010216 (+)
CI01000046_03982069_03996142 FLII, FLII.S coding upstream 84558 3982069 ~ 3997163 (+)
CI01000046_03971520_03980002 TOP3A coding upstream 101619 3971520 ~ 3980102 (+)
CI01000046_04098044_04120141 LLGL1 coding downstream 12696 4096231 ~ 4120352 (+)
CI01000046_04274035_04275654 B9D1 coding downstream 190317 4273852 ~ 4275762 (+)
CI01000046_04308380_04317709 GRAP, GRAPA coding downstream 224845 4308380 ~ 4317970 (+)
CI01000046_04319601_04326459 NA coding downstream 236066 4319601 ~ 4326532 (+)
CI01000046_04478947_04510165 ARHGAP23A coding downstream 395412 4478947 ~ 4511125 (+)
G197039 NA non-coding upstream 130893 3950585 ~ 3950828 (+)
G197024 NA non-coding upstream 166884 3914584 ~ 3914837 (+)
G196887 NA non-coding upstream 189880 3891020 ~ 3891841 (+)
G196994 NA non-coding upstream 309643 3771842 ~ 3772078 (+)
G196846 NA non-coding upstream 437023 3644183 ~ 3644698 (+)
G196871 NA non-coding downstream 42463 4125998 ~ 4126444 (+)
G196867 NA non-coding downstream 43342 4126877 ~ 4127188 (+)
G197051 NA non-coding downstream 44078 4127613 ~ 4128009 (+)
G196870 NA non-coding downstream 44970 4128505 ~ 4128795 (+)
G197052 NA non-coding downstream 50753 4134288 ~ 4137233 (+)
CI01000046_03943890_03945302 ATP5J2 other upstream 136221 3943794 ~ 3945500 (+)
G196936 NA other upstream 887450 3186995 ~ 3194271 (+)
CI01000046_02451052_02454565 MAFK other upstream 1624441 2442395 ~ 2457280 (+)
CI01000046_01865451_01881353 NA other upstream 2122573 1865451 ~ 1881369 (+)
CI01000046_01540075_01668012 HS3ST4 other upstream 2518384 1539494 ~ 1668012 (+)
G197055 NA other downstream 65888 4149423 ~ 4149780 (+)
G197121 NA other downstream 287476 4371011 ~ 4371430 (+)
G196869 NA other downstream 331995 4415530 ~ 4421687 (+)
G197352 NA other downstream 1190847 5259318 ~ 5276453 (+)
G197528 NA other downstream 1642586 5726121 ~ 5742684 (+)

Expression


Co-expression Network