CI01000046_04579543_04581492


Basic Information

Item Value
gene id CI01000046_04579543_04581492
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 4579281 ~ 4581540 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_04579543_04581492.mRNA
GGATAAAAAAAGAAACGCTTTAGCAAATTTGTGTCTTAGGTAACAGATTACATCAATATAGAAAGCATGAAACTCAAATAGCAAGTGTTCAAGAAGCATTGACCACAGATAATCATTTATCATTAGTTTGAGATGATGCCCCCCAACAACCAATGACAAAGTGGCAGGAAATGATGGCAGGAAACATCATTACTGAAGTAGTNCCCAGCCAGAATTCTTCACCAGATCCTCTCTTCAGTTCTCATTTCTTTACTTGCAGAAAATGTCTGAAGCAATTTATTCCAATACTGTTCCAAGACCAATCTCAAGATCTGCACGTAAAGATACAAATTACAGCGATGGCACAGAACAGCTGATGAGTTGTGAACCAGTAACACACTGCTCTTATTCAGATTTCCCAGAGAAGTGGGTCCAGGAGAAGGGCAGATTCTATGTTTTCTCCACTGATACCATGGACTGGAACAGCAGCAGAGAACGCTGTCAGGATCTGGGAGGAGACCTGGTCATCATCAACAGCATGGAGGAGCAGGTACAGATAATATAACATCATTGGAACTTATCATTTCAGACGAAAGATGTACACTGAACTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_04579543_04581492.mRNA True 592 mRNA 0.40 3 4579281 4581540

Neighbor

gene id symbol gene type direction distance location
CI01000046_04563154_04565515 NA coding upstream 13554 4563087 ~ 4565727 (+)
CI01000046_04545960_04557955 NMT1A, NMT1 coding upstream 20828 4545960 ~ 4558453 (+)
CI01000046_04532653_04542785 PLCD3, PLCD3A coding upstream 36496 4532653 ~ 4542785 (+)
CI01000046_04478947_04510165 ARHGAP23A coding upstream 68156 4478947 ~ 4511125 (+)
CI01000046_04319601_04326459 NA coding upstream 252749 4319601 ~ 4326532 (+)
CI01000046_04584213_04592141 NA coding downstream 2122 4583662 ~ 4592290 (+)
CI01000046_04594068_04600391 RETSAT coding downstream 12171 4593711 ~ 4600988 (+)
CI01000046_04602081_04604842 CDK21 coding downstream 20541 4602081 ~ 4605621 (+)
CI01000046_04615766_04638586 NA coding downstream 34226 4615766 ~ 4638942 (+)
CI01000046_04694468_04701075 NA coding downstream 112115 4693655 ~ 4701253 (+)
G196889 NA non-coding upstream 135399 4437237 ~ 4443882 (+)
G197140 NA non-coding upstream 143029 4435878 ~ 4436252 (+)
G197136 NA non-coding upstream 157322 4421736 ~ 4421959 (+)
G197135 NA non-coding upstream 165932 4412862 ~ 4413349 (+)
G197130 NA non-coding upstream 181451 4397518 ~ 4397830 (+)
G197153 NA non-coding downstream 59641 4641181 ~ 4643913 (+)
G197158 NA non-coding downstream 67410 4648950 ~ 4708769 (+)
G197156 NA non-coding downstream 76467 4658007 ~ 4684792 (+)
G197169 NA non-coding downstream 140649 4722189 ~ 4736190 (+)
G197170 NA non-coding downstream 154724 4736264 ~ 4744725 (+)
G196869 NA other upstream 157594 4415530 ~ 4421687 (+)
G197121 NA other upstream 207851 4371011 ~ 4371430 (+)
G197055 NA other upstream 429501 4149423 ~ 4149780 (+)
CI01000046_03943890_03945302 ATP5J2 other upstream 633781 3943794 ~ 3945500 (+)
G196936 NA other upstream 1385010 3186995 ~ 3194271 (+)
G197352 NA other downstream 692842 5259318 ~ 5276453 (+)
G197528 NA other downstream 1144581 5726121 ~ 5742684 (+)
CI01000046_06808895_06820945 GSPT1, ERF3B, GSPT1L other downstream 2238398 6808507 ~ 6821543 (+)

Expression


Co-expression Network