XLOC_009371


Basic Information

Item Value
gene id XLOC_009371
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 33665924 ~ 33681678 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018834
tttttcttttcttcttttttttacagcTCTTCATGTGGCATTATCTGCTTTCCTTCTGGAGTGGGGGCCTTATGTTTACAGAAGAGGCCCAAGATGTTCCCGTGCCTCGCCTTGGGCTGTTGATTTAAATCCAAATACCATTCTTCAGATACTTCTGCCATTATATCATACAGTCAGTCTGTGTCGTGCATCTGTTCAAGCAGGCTAGTGGAATGGTGTGTACCACCACGCTACCCTTACATAAAGGATCCTTTAAATGCTCTAGCAGTCTACAACAGTCGACACATGAGAGCAGCTGTGAGAGACAAGACCAGtgcATCAGGTCCTGAAGTGAGGCCGGGTGGAAATCTCCTGAGATGTGAAGCGGATGAGCTGTCACAGTTCAGTCCCTGCAGCACATCCAGCGTGGAAATTACATGTCCAATGCTGTTGGCCATCCCAGACCACGTTCCCCTCATCTGCCTCTGCTTTTTACCAGAAGGAATTTTCTCCATGATTTTGCCCATCGACCGAGCATGTTAAGGCAGGTGAGACTGGAGTGTGTTTGTAAGGTGAATTAATTTGCTCCTCATTCCATCGAAT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018834 True 582 lncRNA 0.47 3 33665924 33681678

Neighbor

gene id symbol gene type direction distance location
XLOC_009370 CT027778.1 coding downstream 2752 33663055 ~ 33663172 (-)
XLOC_009369 stard13b coding downstream 25034 33467298 ~ 33640890 (-)
XLOC_009368 nbeab coding downstream 340878 32895659 ~ 33325046 (-)
XLOC_009367 NA coding downstream 847929 32813736 ~ 32817995 (-)
XLOC_009366 CR855389.2 coding downstream 1030147 32633290 ~ 32635777 (-)
XLOC_009372 trmt9b coding upstream 21240 33702918 ~ 33734112 (-)
XLOC_009373 pds5b coding upstream 62871 33744549 ~ 33807758 (-)
XLOC_009374 n4bp2l2 coding upstream 128186 33809864 ~ 33818872 (-)
XLOC_009375 mmp13b coding upstream 144072 33825750 ~ 33834577 (-)
XLOC_009376 CR855379.2 coding upstream 186983 33868661 ~ 33887667 (-)
XLOC_009364 NA non-coding downstream 1232251 32413314 ~ 32433673 (-)
XLOC_009362 CR388091.1 non-coding downstream 1602515 32063292 ~ 32063409 (-)
XLOC_009377 NA non-coding upstream 187901 33869579 ~ 33877331 (-)
XLOC_009383 FP017158.1 non-coding upstream 597743 34279421 ~ 34279535 (-)
XLOC_009389 NA non-coding upstream 920844 34602522 ~ 34607406 (-)
XLOC_009404 CR848683.2 non-coding upstream 1732788 35414466 ~ 35661368 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000095_01675024_01682552 NA coding CI01000095 null 1673961 ~ 1682780 (-)