CI01000046_05305482_05310465


Basic Information

Item Value
gene id CI01000046_05305482_05310465
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 5305193 ~ 5310479 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_05305482_05310465.mRNA
TGATAAAAAGAATCACGTGAATGATAATTGTTACATGCGTAGAAATAATGAAATACAATATACACTAAAACATCTTAAGTAACACACTGAGTAAATATGTGTATTGTCATTAAAGTTTAAGTATTATTAGTTCATCCATACATAGAGGTTTCGTGTAAAATAGTAACTACTAGACAGATGCAAGCCACATTTTTAAACGTATGCGTAAATTTTGTAAAAGTGCCCAAAACCCTGCGATCAATGACCGTACATTGTACTATACATATTAGGAACAACAAAAACACCAGCGATGGCTCAAAACGCTCTCTTCCAAAGCCAATGCGTTTGGAGTACGACGCGCTTAGATGATTGGACAGCCAGCACATCAATCAACAACGGCGCACTGTCATTGGTCTATCGCTCATCCGCCTACTTCACTGGGCGTTTCAATGAACAGAGGAACAAGTCGGAACGCAGGAGACGAAGCGAAAAGCAGAGAAAATGGCCGACAGATTCTCTAGATTCAACGAAGAACGTGATTTCCAGATACAGTCTGACAGTCTGTGACAAAGGCTTGTCTTTAATTGACTATTGGCACTTTCTACTTGCAGTGTTCACCAAACAATTGAATGCAGTGCATTTATTTGTGAATATCTGAGCTGAAGAGGCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_05305482_05310465.mRNA True 651 mRNA 0.39 2 5305193 5310479

Neighbor

gene id symbol gene type direction distance location
CI01000046_05279865_05281709 BAXA, BAX coding upstream 23066 5279865 ~ 5282127 (+)
CI01000046_04861221_04879259 MPP3A, MPP3 coding upstream 424524 4861221 ~ 4880669 (+)
CI01000046_04841558_04852685 NA coding upstream 452017 4841558 ~ 4853176 (+)
CI01000046_04811748_04819011 ZNF281A coding upstream 485825 4811610 ~ 4819368 (+)
CI01000046_04806234_04808207 NA coding upstream 496858 4805355 ~ 4808335 (+)
CI01000046_05315583_05316990 NA coding downstream 4706 5315185 ~ 5317089 (+)
CI01000046_05335886_05341205 GPATCH8 coding downstream 25407 5335886 ~ 5341888 (+)
CI01000046_05392316_05401559 ARF3A, ARF2B, ARF1L, ARF3, ARF2, ARF1, ARF3.S, ARF5, ARF2A, ARF5.L coding downstream 81504 5391983 ~ 5402075 (+)
CI01000046_05481838_05537970 NA coding downstream 171359 5481838 ~ 5538151 (+)
CI01000046_05562155_05568637 MLX coding downstream 251478 5561957 ~ 5569463 (+)
G197372 NA non-coding upstream 10786 5291971 ~ 5294407 (+)
G197352 NA non-coding upstream 28740 5259318 ~ 5276453 (+)
G197393 NA non-coding upstream 48411 5249761 ~ 5256782 (+)
G197457 NA non-coding upstream 56611 5248350 ~ 5248582 (+)
G197456 NA non-coding upstream 57429 5247299 ~ 5247764 (+)
G197383 NA non-coding downstream 70642 5381121 ~ 5384299 (+)
G197399 NA non-coding downstream 75991 5386470 ~ 5386716 (+)
G197466 NA non-coding downstream 80643 5391122 ~ 5391352 (+)
G197386 NA non-coding downstream 120976 5431455 ~ 5769358 (+)
G197410 NA non-coding downstream 276702 5587181 ~ 5625506 (+)
G196869 NA other upstream 883506 4415530 ~ 4421687 (+)
G197121 NA other upstream 933763 4371011 ~ 4371430 (+)
G197055 NA other upstream 1155413 4149423 ~ 4149780 (+)
CI01000046_03943890_03945302 ATP5J2 other upstream 1359693 3943794 ~ 3945500 (+)
G197528 NA other downstream 415642 5726121 ~ 5742684 (+)
CI01000046_06808895_06820945 GSPT1, ERF3B, GSPT1L other downstream 1509459 6808507 ~ 6821543 (+)

Expression


Co-expression Network