CI01000046_05562155_05568637 (MLX)


Basic Information

Item Value
gene id CI01000046_05562155_05568637
gene name MLX
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 5561957 ~ 5569463 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_05562155_05568637.mRNA
ATATATAAAAGAGTAAATGAACGAATAGATGAATTAATAATCATTTCCGTTGAATTAACAATTAACTTATCGGAAGTCACAAGGAAAAGTGGGTTTTAAGAGAGATGGACAGAGTGGAGGATGAGTCTCTAGAATGAGGTTTAGATAATGGCCACTAGGGGGCACACTTCATAATATCCCATCATTGTTTATTCCAAAATGACGGAAAACAGCGCGTCGCCGGAGGATCCCTGGCTAAAAGTCTGCAATGGTTGGTTTCACTTTCTAGCTCAGCTGGCTAGCCGTAAAGTTCAGCATGTCAAAAGAACAATTACAGCTTCCCACATATTCTTTAAACGTAGAACGGATGGCGGCTTCAGCGACAACGGCTTCGATCACAGTTTCTTTGCTGATAATGCTTGCAAAGGAAGTATGGTGTCAAGAGCCAACAGCATTGGATCCACAAGTGCCTCTTCAGTACCAAACACAGATGATGAAGACAGTGACAACAGACATGAGACGCCCTATAAGGAGTCGTATAAAGACCGGAGGAGACAGGCACACACACAGGCAGAGCAGAAACGCAGGGATGCCATCAAGAAAGGCTATGATGACCTGCAGTCTATAGTGCCTACATGCCAGCAGCAGTCTGACTTTGCCATGGCAACACAGAAGATCAGCAAAGCTACAGTCCTTCAGAAGACAATCGACTACATTCAGTTTCTCCATAAAGAAAAGAAGAAGCAGGAAGAGGATGTTTCCACACTTAGGAAGGAGGTGATGGCACTGAAAATTATGAAAACGAACTACGAGCACATTGTGAAGGCCCATCAGAATAACCCTCAGCAAGGCAGCGAGCAGGTTTCAGATCAGGTGAAGTTCAGCGTGTTTCAGAGCATCATGGACTCTCTATTCCAGTCCTTCAGTGCCACAGTGTCAGTCAGCAGTTTTCAGGAGCTCTCCGCCTGCGTCTTCAGCTGGATTGAGGAACACTGCAAGCCACAGACGCTGAGAGAGTATGTGGTGACTGTGCTGCAGCAGTATTCATATTTTCACAAGTTTGCAGTTGTGATGCTGAGATACACTAGCAACCTTACAACCACAAATATGAGGAACACCCAGCTGTCCAACAACTTCACAACCCACATACCGAGGTGTGAAATGTCTCAGTTTTCTGCATTTTAAACCATACAGCTGACTTTGAATGATTAAGCTTGGTGTGTTGCATTCAGTTATCATCTTTACCTCATTTTCAAGTCATTTTCCAAAGCACAACTACATTTTCACCTTTGCAAACAGCTTAGTGCTGGAAAGGGGAACTGAGAGGTCTAGTTACACTGTGATGCATCACTGTCAGTTGGTTTTTACGTCCAAAAACAGCTGTCCCACATGCTTTAATATATTTAAAGTTAGGCAAGGCTGAGCCATCTTTGTTCCTCTTTTAAGCCACTGTCCTTGGGGATGCTGTGACCAAAGATTGCAGTGTCTACGCACAAATAATGGAAGATAAGCCTCTTATTGTCATTTTATGTACATTTTTATTCAGCTGTGTGTAGCGCAATAATGTCCAGTGTTTTATTCTACATTTATGTTAATGGTTTGAGCTCTTGTGATCAGTAAGTTTTCTTCTGCATAAGCTATCATTGAAGACACAGTCGCATCCGTGCGTGGTAGCAACTTCACATGGTGTGACCGCCCAATTTTTATTTGTGTTTTAATGAATGTTAATTTAGGCATAATGAAAATTAGAATCAAAGTCTACTCAGGACACAGATTTTTATGTATCAAGATCTTTTTTAAATAACAGATTGTACAATCAGCTGTTTGACCTGTGCTGGAATAAGGGACGTCTTCACAAGTTAAGCCATACAGTGAAGCGAAATGCTAGCTCATGAAAACGAGGCTACGTCGTGCTGAACTACTATACTAGACTCTGTGCTTCTGCATTTCTGACTTCAGCAAGAGAATCTGTTTGAATTATTTTTGTATCGGTATACTTTTTAATTGAAAA

Function

symbol description
mlx Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of transcription, DNA-templated. Predicted to be active in nucleus. Orthologous to human MLX (MAX dimerization protein MLX).

NR:

description
MAX-like protein X

GO:

id name namespace
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K09113 MLX; MAX-like protein X

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_05562155_05568637.mRNA True 1990 mRNA 0.42 10 5561957 5569463

Neighbor

gene id symbol gene type direction distance location
CI01000046_05481838_05537970 NA coding upstream 23806 5481838 ~ 5538151 (+)
CI01000046_05392316_05401559 ARF3A, ARF2B, ARF1L, ARF3, ARF2, ARF1, ARF3.S, ARF5, ARF2A, ARF5.L coding upstream 159882 5391983 ~ 5402075 (+)
CI01000046_05335886_05341205 GPATCH8 coding upstream 220069 5335886 ~ 5341888 (+)
CI01000046_05315583_05316990 NA coding upstream 244868 5315185 ~ 5317089 (+)
CI01000046_05305482_05310465 NA coding upstream 251478 5305193 ~ 5310479 (+)
CI01000046_05635252_05642052 DLX4A coding downstream 64308 5633771 ~ 5642292 (+)
CI01000046_05643458_05646109 DUSP3B coding downstream 73995 5643458 ~ 5646116 (+)
CI01000046_05686868_05688748 NA coding downstream 115075 5684538 ~ 5689380 (+)
CI01000046_05756222_05757145 CDK5R1A coding downstream 186567 5756030 ~ 5757489 (+)
CI01000046_05775279_05805016 NA coding downstream 205816 5775279 ~ 5805114 (+)
G197466 NA non-coding upstream 170605 5391122 ~ 5391352 (+)
G197399 NA non-coding upstream 175241 5386470 ~ 5386716 (+)
G197383 NA non-coding upstream 177658 5381121 ~ 5384299 (+)
G197391 NA non-coding upstream 235759 5289001 ~ 5326198 (+)
G197410 NA non-coding downstream 17718 5587181 ~ 5625506 (+)
G197417 NA non-coding downstream 86116 5655579 ~ 5665352 (+)
G197529 NA non-coding downstream 146893 5716356 ~ 5719969 (+)
G197355 NA non-coding downstream 174106 5743569 ~ 5746418 (+)
G197377 NA non-coding downstream 237023 5806486 ~ 5807376 (+)
G197352 NA other upstream 285504 5259318 ~ 5276453 (+)
G196869 NA other upstream 1140270 4415530 ~ 4421687 (+)
G197121 NA other upstream 1190527 4371011 ~ 4371430 (+)
G197055 NA other upstream 1412177 4149423 ~ 4149780 (+)
CI01000046_03943890_03945302 ATP5J2 other upstream 1616457 3943794 ~ 3945500 (+)
G197528 NA other downstream 156658 5726121 ~ 5742684 (+)
CI01000046_06808895_06820945 GSPT1, ERF3B, GSPT1L other downstream 1250475 6808507 ~ 6821543 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location