XLOC_009377


Basic Information

Item Value
gene id XLOC_009377
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 33869579 ~ 33877331 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019209
ctgttgtcgcggtcaactccgctctgcatctcaagtccgccaacgtacatggcgagctaactgggcatactggtaacagcgggaaagcagtccacacggaggtaagtgTTCCAACCTGATTTGCTCATTAATCTGCTCGAGTGTTCGCTGGAGCAGGACCATCACTCCTTCAACCACCTCCTTCTCCTTCAGCAGCTCCTCTTCCACCTCATCATGCACCAGATCAATGGCCACACGCTTCTGTCTGAAGATATCCCATAAAAATCACATAATTAGGCCAAAATGCACTTCTTGCAGCCAATTAGCAGTAAGGGGTGTGTCTTGCAATGATAGTGGATAAGCAAAAAGGGCGTGGTCATGTGTGGTTATGGGCATGTTTGTTAAATATCAACATTGTTTGGTTGTTCAATGCTGTTCTGTGAATGCCGCTGATCATTTCATGTAAATGTGATTGCCATACCTGCATTTTTCAGGAGTTAATTCAGTTGTTCAGTGTTTGTTACTACTGTATATCTGAATTGACAATATACATGGAATGGATTAATTGAACAACATTGATATTGTAATtgttcattaattattattataattagaatATAGTCTGTTAAATAAACCTGAGTATAAATTTAGTTAGGAGCAaaattggtggctcagtggttaggactcttgcctcacagcaagaaggtcgctggtttgggaagttggcatttc

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019209 True 711 lncRNA 0.42 2 33869579 33877331

Neighbor

gene id symbol gene type direction distance location
XLOC_009375 mmp13b coding downstream 35002 33825750 ~ 33834577 (-)
XLOC_009374 n4bp2l2 coding downstream 50707 33809864 ~ 33818872 (-)
XLOC_009373 pds5b coding downstream 61821 33744549 ~ 33807758 (-)
XLOC_009372 trmt9b coding downstream 135467 33702918 ~ 33734112 (-)
XLOC_009371 NA coding downstream 187901 33665924 ~ 33681678 (-)
XLOC_009378 mag coding upstream 14477 33891808 ~ 33933820 (-)
XLOC_009379 lsr coding upstream 60425 33937756 ~ 33965440 (-)
XLOC_009380 si:dkey-30e9.7 coding upstream 117244 33994575 ~ 34056879 (-)
XLOC_009381 etv1 coding upstream 295040 34172371 ~ 34214440 (-)
XLOC_009382 dgkb coding upstream 338465 34215796 ~ 34326461 (-)
XLOC_009370 CT027778.1 non-coding downstream 206407 33663055 ~ 33663172 (-)
XLOC_009367 NA non-coding downstream 1051584 32813736 ~ 32817995 (-)
XLOC_009366 CR855389.2 non-coding downstream 1233802 32633290 ~ 32635777 (-)
XLOC_009364 NA non-coding downstream 1435906 32413314 ~ 32433673 (-)
XLOC_009383 FP017158.1 non-coding upstream 402090 34279421 ~ 34279535 (-)
XLOC_009389 NA non-coding upstream 725191 34602522 ~ 34607406 (-)
XLOC_009404 CR848683.2 non-coding upstream 1537135 35414466 ~ 35661368 (-)
XLOC_009405 CR848683.1 non-coding upstream 1563409 35440740 ~ 35468800 (-)
XLOC_009406 NA non-coding upstream 1736903 35614234 ~ 35675985 (-)

Expression


Co-expression Network