XLOC_009379 (lsr)


Basic Information

Item Value
gene id XLOC_009379
gene name lsr
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 33937756 ~ 33965440 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018436
ttttgtaaatactataatatatttaaacatatagtAAAGTTAGaaaatacccacacacacacacacacacacacacacacacaaataagtaacacacacacacacacacacacacaaataaggaataatattttgtttaagtTTTAGCAACTAATAATGTTGGCCTTTGAGAATTTAACATGCCTGCTTTGAGTAGATATGAGCTGTTCTAGGTTAAAACCAAAACCTCGAATCGTGTCAATCATAAACTCGGCCTTCTTAGATTGGCAGTGGACTAAACCATTTGTACTACAAAAGGTGGATTACAGGGCGTTGTATTACTAAAGGTTTTTCGTTGTTCTCCTCAAACTGGATGCGCAGTCGCGGAAAACTGTTCTTTAGCATAAAGTGTGATTATTCAGGAAGCAAAACAGATTTGTAACACTCCACATTTTTAAATTTGCAAACTATAGTTCTCATTCGGACCCCTGTAATTTTACGCGTATTGTGTTTGCAGCGGCCTGTTGAGCTCACCTGAGTTTCGGGTTTCACTGCGGTAGGAAATGGAGGACGCACCTGCCTGAGAAAACACAGCTGCTTTATCGACAATTACACGGACTTTCTCTACATACTTTTGACGGATCGTACGCTTTTAAAGCTCTTATGTTTTAATAGATATCAAGAAAATATGTCGCTGGGTGTAATATTTACCCTCCTTTTGTTCACAGGTGTCACCACAGGCATCAATGTGATCTGTACTTATCCACGCTATGTGGTCATAATGTTCCAGCCAGTGACGCTGCGTTGTGATTTCACCACCACATCTACAACCCCTCCACTGATCACCTGGAAATACAAGTCCTACTGCAGAGACCCGATTCAGGCTGCGTTAAACCCCAGCAGTGCTGACAATGCCATTGCTCAGTCCAACCCAAACTACAATCCCAACATAGAGTGTGCAGACAGTGCCAGGACCGTTCGCATAGTCGCTTCCAAACAAACGGCCGTCACGCTTGGAAAAGAGTATCAGGGCCGTCAGATCAGCATCACAAATAATGCAGACCTTAGCATTGTTCAGACTGCATGGGGTGACAGTGGGGTGTACGTCTGCTCTGCTGCCTCAGCTCAGGACCTTTCGGGAAATGGAGAGTGTTACACAGAGCTCATTGTGCTTGAGAGAAAGTCAAATACTACAGACCTGCTGCCTGGCATTGATTTACTGATCATGGAAGACTGGTTGTTAGTGGTGTTGGTGGTCCTGGGTTTCCTCTTGCTGTTGCTCCTGATTGGTATCTGCTGGTGCCAGTGTTGCCCTCACACCTGCTGCTGTTACGTCAGATGCCCCTGCTGCCCGGAGCGCTGCTGCTGTCCCCGCGCATTATATGAGGCTGGTAAAATGGTGAAGTCTGGCATTCCCAGTCAGTACGCAGCCACTGCCTACGCACAAAGCATGTACGGCCAGCCTGCTTACGGAGTTGGTGCAGCCATGCCGGGCATTCCTATGATGCCTATGCAAATGGGAGTTGGTGGTCCTCCATCAAATGGCTATGGCAGAGACTACGATGGAGCCAGCTCAATTGGCCAAGGATCTCAAGTGCCGTTGTTGCAAGAACATGATGCTGGAGGAAACCGTAGTGGATACCGTGTCCAGGCAGACCAAGATGGAAACCCAACACGTGTGCTTTATTACATGGAGCGAGAGGTTGCCAATCTCGACCCCAGTCGCCCAGGGATCGCTCCAGGCAAATACAGTCGTCTGGATGGTATGAGTGAGGTGAGCTCACTTCATGATGGTCCAGACTCTCGAAATCGTGGTCGAGCCAGACCTCCTCAGCTTACAACAGTGTACGATGATGTGGATGAAAACATGAGCACCATCAGCAGTGTCTCTCAGCACATGCGAAGGGATGAGCCCAGACGGGGAGCTGACAGTCGGGGACGCGCTCGTTCCATGGAGAACTTGGACGATATCAGCCGCGGTTACAGAGATCGAGATGACTATCCGCCTGCGCGCCGAGACGGTGGACCCAGGGGTGGTAGACGAGGTTCTGATGATGAGTGGAGCAGTAGCGGACGAGGATACGACCCAGTTGATGACCGTCGCCGCCGTGATTATTCCCCTGACAATCGTCCCCGACATGGAGACTCCTTCCGAGGGGCTGGTTTCCAGGGCCGCCGTACCCGTAGCCGTGATGACCTGATGGATCTGGTGCGTGATCCTGGCCGTGGAGGCAGGGACGAATATGACGACAGCTTCCTCAGGGAGGCCATGGAAAAGAAGAAGCTGGGCGAGCAGCAAAGAGGCCGCAGCCGTGAACGCCTTGATAGCGAGAGTGATCGATCCGACCGCTACAGAGGGCATCACAGTGGACCGCCACCTTTACCACTCGTACCAGCCTCCGGAAACCCTGATCGCCGTGGAAACCACAGCAACTTCCCACCTCCTCCCCCTCCCTATACTGAGGACACTGACAGCTTGCCATCATCCAAAAAGAGCAACTTAAAAAAGAATGGAGCTGTGAGCAGAGAGAGTCTGGTGGTGTGACGCTGCAGTGAAACCTCTGCAGGAAGTGTTTCATCTGCATATTCACCTCACTTATGAGTGGTTATGTGTTCAGGTTAAATGCAGACAAACATTGTGTATAGTGAAACGTGAATTTGTAATGTTCTTTTACGacatttttaatgatatttttgtAGCTACcgatatttttgattattttactgATATGCAGGCTCATTTATGATCTTGAAACTGATGTGCTTTTCTTACGGTATGTTTCCTGCCAGGAACATTTTTAGCAGTAAGTACTTACCCATGACTTCTTACACACAGCAGTCTGAATAATAATGTAACTTTTAATTGGTAATCATTTGTTTCATAGAGAAAATGATGAGCAATACAGGATTCCAGgtgttcatttaaaataatgtaatataaataaacgATTAGACTCAAGTGTGGACTGAATGTTAATTGTAGTCTTAAGATGTCATGCAGTTTCCGCAAGAGAGTGATTTTTATAaggtaattttacttttattataaatattttttagatgcaaaaaaaaaaaagtcagtgtgcttattttgcttgtttttatacATATTGCATACGTTTAGTATCGGTCTTAAATTTGGTCAcacagttgtttgtttgtttttatttttgtacagtcATGTAagtacattataaataaagcattttctaTTGTGTTTAGATGTGATGTTCTGTCCCGGATCAGATGTGACATTTGCACAGCCTTTTTTACTTaatatattgatgtttttttaattatgaccactagatgtcagtTTACTATTCTTGTAAGTACACTTTTAGTTGCAGGGAAATGTGCTGAGTTCTTATACATTTGACATtgatgtgtacagttgaagtcagaattattagcccccctttgaatttttttttctttattaaatattttcctaatgatgtttaacagagcaaaaaaaaatgttcaaagtatgtctgataatattatttcttctagagaaagtcttatttttttatttcggctagaataaaagcagttttaaattttttatgaaccattttaacgtcaaaattattagccccttaaagctattttttccgatagtctacagaacaaatcatccttatacaatgacttgcctagttaacctcattatGTCATttaaggctgtatagaagtgtcttgaaaaatttccagtaaaatattatttactgtcatcatggcaaagataaaagaaatcagttattagaaatgagttaataaagctATTATTTCTGGAAATGTGTTcaataaatcttctctctgttaaacagaaattggggcaaaatAAATAGGGAGGCTAATAACTCTTACCTTAACCGTATGtgtaaattattatcattatgttaTCATTGAACCACTGTATATCATTTGTATGTCTACTAAATGAATACCAATTTACAGTTCTTACTGTTTGGTGAATTTGAGCTTTATTGTATGGATCCTGTACAGATCTATAAACCAGCCTATTctcctaaaatgtatataaaagagTGCTCACTTGTAGGCGTTCTTACATCTTGGCTGTTATCTTGTGGGCTTAACGGAAAAAAAAGCATCTTTTCTAACCCAGATGGAGATGAAGGACCAACAACTGCCTATGTCTCAGAGTGAGTCGTAGTTTGTGGATCCACCATTGGTGGCCTGCCAAGATCACAGCAGAAAGGTGGCCATCAACACTCTCATCCATCTGCTGTCGTAAAAGCTGCCATTCCTTAAGATAGACAGGAGGATAGGTGAGATCTACTTAAAGGGATGCATTACAAAGTGTCAATTCTGTCTTTACTTGCCCTTCACTTATTTgagttcttctgttgaacacagtatatatattttgtagaaAGCCAGAAACCAGGGGctgttgaattttatttttttatctctaAATGTCAATAGCTACtagcttttgtgtttaacagaaaataattGCAGctggtgtttttcagccaatgctAAACTTCCGGTGGAAgg
>TCONS_00018437
AAATGGAGGACGCACCTGCCTGAGAAAACACAGCTGCTTTATCGACAATTACACGGACTTTCTCTACATACTTTTGACGGATCGTACGCTTTTAAAGCTCTTATGTTTTAATAGATATCAAGAAAATATGTCGCTGGGTGTAATATTTACCCTCCTTTTGTTCACAGGTGTCACCACAGGCATCAATGTGATCTGTACTTATCCACGCTATGTGGTCATAATGTTCCAGCCAGTGACGCTGCGTTGTGATTTCACCACCACATCTACAACCCCTCCACTGATCACCTGGAAATACAAGTCCTACTGCAGAGACCCGATTCAGGCTGCGTTAAACCCCAGCAGTGCTGACAATGCCATTGCTCAGTCCAACCCAAACTACAATCCCAACATAGAGTGTGCAGACAGTGCCAGGACCGTTCGCATAGTCGCTTCCAAACAAACGGCCGTCACGCTTGGAAAAGAGTATCAGGGCCGTCAGATCAGCATCACAAATAATGCAGACCTTAGCATTGTTCAGACTGCATGGGGTGACAGTGGGGTGTACGTCTGCTCTGCTGCCTCAGCTCAGGACCTTTCGGGAAATGGAGAGTGTTACACAGAGCTCATTGTGCTTGACTGGTTGTTAGTGGTGTTGGTGGTCCTGGGTTTCCTCTTGCTGTTGCTCCTGATTGGTATCTGCTGGTGCCAGTGTTGCCCTCACACCTGCTGCTGTTACGTCAGATGCCCCTGCTGCCCGGAGCGCTGCTGCTGTCCCCGCGCATTATATGAGGCTGGTAAAATGGTGAAGTCTGGCATTCCCAGTCAGTACGCAGCCACTGCCTACGCACAAAGCATGTACGGCCAGCCTGCTTACGGAGTTGGTGCAGCCATGCCGGGCATTCCTATGATGCCTATGCAAATGGGAGTTGGTGGTCCTCCATCAAATGGCTATGGCAGAGACTACGATGGAGCCAGCTCAATTGGCCAAGGATCTCAAGTGCCGTTGTTGCAAGAACATGATGCTGGAGGAAACCGTAGTGGATACCGTGTCCAGGCAGACCAAGATGGAAACCCAACACGTGTGCTTTATTACATGGAGCGAGAGGTTGCCAATCTCGACCCCAGTCGCCCAGGGATCGCTCCAGTGGATGGTATGAGTGAGGTGAGCTCACTTCATGATGGTCCAGACTCTCGAAATCGTGGTCGAGCCAGACCTCCTCAGCTTACAACAGTGTACGATGATGTGGATGAAAACATGAGCACCATCAGCAGTGTCTCTCAGCACATGCGAAGGGATGAGCCCAGACGGGGAGCTGACAGTCGGGGACGCGCTCGTTCCATGGAGAACTTGGACGATATCAGCCGCGGTTACAGAGATCGAGATGACTATCCGCCTGCGCGCCGAGACGGTGGACCCAGGGGTGGTAGACGAGGTTCTGATGATGAGTGGAGCAGTAGCGGACGAGGATACGACCCAGTTGATGACCGTCGCCGCCGTGATTATTCCCCTGACAATCGTCCCCGACATGGAGACTCCTTCCGAGGGGCTGGTTTCCAGGGCCGCCGTACCCGTAGCCGTGATGACCTGATGGATCTGGTGCGTGATCCTGGCCGTGGAGGCAGGGACGAATATGACGACAGCTTCCTCAGGGAGGCCATGGAAAAGAAGAAGCTGGGCGAGCAGCAAAGAGGCCGCAGCCGTGAACGCCTTGATAGCGAGAGTGATCGATCCGACCGCTACAGAGGGCATCACAGTGGACCGCCACCTTTACCACTCGTACCAGCCTCCGGAAACCCTGATCGCCGTGGAAACCACAGCAACTTCCCACCTCCTCCCCCTCCCTATACTGAGGACACTGACAGCTTGCCATCATCCAAAAAGAGCAACTTAAAAAAGAATGGAGCTGTGAGCAGAGAGAGTCTGGTGGTGTGACGCTGCAGTGAAACCTCTGCAGGAAGTGTTTCATCTGCATATTCACCTCACTTATGAGTGGTTATGTGTTCAGGTTAAATGCAGACAAACATTGTGTATAGTGAAACGTGAATTTGTAATGTTCTTTTACGacatttttaatgatatttttgtAGCTACcgatatttttgattattttactgATATGCAGGCTCATTTATGATCTTGAAACTGATGTGCTTTTCTTACGGTATGTTTCCTGCCAGGAACATTTTTAGCAGTAAGTACTTACCCATGACTTCTTACACACAGCAGTCTGAATAATAATGTAACTTTTAATTGGTAATCATTTGTTTCATAGAGAAAATGATGAGCAATACAGGATTCCAGgtgttcatttaaaataatgtaatataaataaacgATTAGACTCAAGTGTGGACTGAATGTTAATTGTAGTCTTAAGATGTCATGCAGTTTCCGCAAGAGAGTGATTTTTATAaggtaattttacttttattataaatattttttagatgcaaaaaaaaaaaagtcagtgtgcttattttgcttgtttttatacATATTGCATACGTTTAGTATCGGTCTTAAATTTGGTCAcacagttgtttgtttgtttttatttttgtacagtcATGTAagtacattataaataaagcattttctaTTGTGTTTA
>TCONS_00018438
TTTCGGGTTTCACTGCGGTAGGAAATGGAGGACGCACCTGCCTGAGAAAACACAGCTGCTTTATCGACAATTACACGGACTTTCTCTACATACTTTTGACGGATCGTACGCTTTTAAAGCTCTTATGTTTTAATAGATATCAAGAAAATATGTCGCTGGGTGTAATATTTACCCTCCTTTTGTTCACAGGTGTCACCACAGGCATCAATGTGATCTGTACTTATCCACGCTATGTGGTCATAATGTTCCAGCCAGTGACGCTGCGTTGTGATTTCACCACCACATCTACAACCCCTCCACTGATCACCTGGAAATACAAGTCCTACTGCAGAGACCCGATTCAGGCTGCGTTAAACCCCAGCAGTGCTGACAATGCCATTGCTCAGTCCAACCCAAACTACAATCCCAACATAGAGTGTGCAGACAGTGCCAGGACCGTTCGCATAGTCGCTTCCAAACAAACGGCCGTCACGCTTGGAAAAGAGTATCAGGGCCGTCAGATCAGCATCACAAATAATGCAGACCTTAGCATTGTTCAGACTGCATGGGGTGACAGTGGGGTGTACGTCTGCTCTGCTGCCTCAGCTCAGGACCTTTCGGGAAATGGAGAGTGTTACACAGAGCTCATTGTGCTTGACTGGTTGTTAGTGGTGTTGGTGGTCCTGGGTTTCCTCTTGCTGTTGCTCCTGATTGGTATCTGCTGGTGCCAGTGTTGCCCTCACACCTGCTGCTGTTACGTCAGATGCCCCTGCTGCCCGGAGCGCTGCTGCTGTCCCCGCGCATTATATGAGGCTGGTAAAATGGTGAAGTCTGGCATTCCCAGTCAGTACGCAGCCACTGCCTACGCACAAAGCATGTACGGCCAGCCTGCTTACGGAGTTGGTGCAGCCATGCCGGGCATTCCTATGATGCCTATGCAAATGGGAGTTGGTGGTCCTCCATCAAATGGCTATGGCAGAGACTACGATGGAGCCAGCTCAATTGGCCAAGGATCTCAAGTGCCGTTGTTGCAAGAACATGATGCTGGAGGAAACCGTAGTGGATACCGTGTCCAGGCAGACCAAGATGGAAACCCAACACGTGTGCTTTATTACATGGAGCGAGAGGTTGCCAATCTCGACCCCAGTCGCCCAGGGATCGCTCCAGGCAAATACAGTCGTCTGGATGGTATGAGTGAGGTGAGCTCACTTCATGATGGTCCAGACTCTCGAAATCGTGGTCGAGCCAGACCTCCTCAGCTTACAACAGTGTACGATGATGTGGATGAAAACATGAGCACCATCAGCAGTGTCTCTCAGCACATGCGAAGGGATGAGCCCAGACGGGGAGCTGACAGTCGGGGACGCGCTCGTTCCATGGAGAACTTGGACGATATCAGCCGCGGTTACAGAGATCGAGATGACTATCCGCCTGCGCGCCGAGACGGTGGACCCAGGGGTGGTAGACGAGGTTCTGATGATGAGTGGAGCAGTAGCGGACGAGGATACGACCCAGTTGATGACCGTCGCCGCCGTGATTATTCCCCTGACAATCGTCCCCGACATGGAGACTCCTTCCGAGGGGCTGGTTTCCAGGGCCGCCGTACCCGTAGCCGTGATGACCTGATGGATCTGGTGCGTGATCCTGGCCGTGGAGGCAGGGACGAATATGACGACAGCTTCCTCAGGGAGGCCATGGAAAAGAAGAAGCTGGGCGAGCAGCAAAGAGGCCGCAGCCGTGAACGCCTTGATAGCGAGAGTGATCGATCCGACCGCTACAGAGGGCATCACAGTGGACCGCCACCTTTACCACTCGTACCAGCCTCCGGAAACCCTGATCGCCGTGGAAACCACAGCAACTTCCCACCTCCTCCCCCTCCCTATACTGAGGACACTGACAGCTTGCCATCATCCAAAAAGAGCAACTTAAAAAAGAATGGAGCTGTGAGCAGAGAGAGTCTGGTGGTGTGACGCTGCAGTGAAACCTCTGCAGGAAGTGTTTCATCTGCATATTCACCTCACTTATGAGTGGTTATGTGTTCAGGTTAAATGCAGACAAACATTGTGTATAGTGAAACGTGAATTTGTAATGTTCTTTTACGacatttttaatgatatttttgtAGCTACcgatatttttgattattttactgATATGCAGGCTCATTTATGATCTTGAAACTGATGTGCTTTTCTTACGGTATGTTTCCTGCCAGGAACATTTTTAGCAGTAAGTACTTACCCATGACTTCTTACACACAGCAGTCTGAATAATAATGTAACTTTTAATTGGTAATCATTTGTTTCATAGAGAAAATGATGAGCAATACAGGATTCCAGgtgttcatttaaaataatgtaatataaataaacgATTAGACTCAAGTGTGGACTGAATGTTAATTGTAGTCTTAAGATGTCATGCAGTTTCCGCAAGAGAGTGATTTTTATAaggtaattttacttttattataaatattttttagatgcaaaaaaaaaaaagtcagtgtgcttattttgcttgtttttatacATATTGCATACGTTTAGTATCGGTCTTAAATTTGGTCAcacagttgtttgtttgtttttatttttgtacagtcATGTAagtacattataaataaagcattttctaTTGTG
>TCONS_00018439
TGGAGGACGCACCTGCCTGAGAAAACACAGCTGCTTTATCGACAATTACACGGACTTTCTCTACATACTTTTGACGGATCGTACGCTTTTAAAGCTCTTATGTTTTAATAGATATCAAGAAAATATGTCGCTGGGTGTAATATTTACCCTCCTTTTGTTCACAGGTGTCACCACAGGCATCAATGTGATCTGTACTTATCCACGCTATGTGGTCATAATGTTCCAGCCAGTGACGCTGCGTTGTGATTTCACCACCACATCTACAACCCCTCCACTGATCACCTGGAAATACAAGTCCTACTGCAGAGACCCGATTCAGGCTGCGTTAAACCCCAGCAGTGCTGACAATGCCATTGCTCAGTCCAACCCAAACTACAATCCCAACATAGAGTGTGCAGACAGTGCCAGGACCGTTCGCATAGTCGCTTCCAAACAAACGGCCGTCACGCTTGGAAAAGAGTATCAGGGCCGTCAGATCAGCATCACAAATAATGCAGACCTTAGCATTGTTCAGACTGCATGGGGTGACAGTGGGGTGTACGTCTGCTCTGCTGCCTCAGCTCAGGACCTTTCGGGAAATGGAGAGTGTTACACAGAGCTCATTGTGCTTGAGAGAAAGTCAAATACTACAGACCTGCTGCCTGGCATTGATTTACTGATCATGGAAGACTGGTTGTTAGTGGTGTTGGTGGTCCTGGGTTTCCTCTTGCTGTTGCTCCTGA
>TCONS_00018440
ACTGCGGTAGGAAATGGAGGACGCACCTGCCTGAGAAAACACAGCTGCTTTATCGACAATTACACGGACTTTCTCTACATACTTTTGACGGATCGTACGCTTTTAAAGCTCTTATGTTTTAATAGATATCAAGAAAATATGTCGCTGGGTGTAATATTTACCCTCCTTTTGTTCACAGGTGTCACCACAGGCATCAATGTGATCTGTACTTATCCACGCTATGTGGTCATAATGTTCCAGCCAGTGACGCTGCGTTGTGATTTCACCACCACATCTACAACCCCTCCACTGATCACCTGGAAATACAAGTCCTACTGCAGAGACCCGATTCAGGCTGCGTTAAACCCCAGCAGTGCTGACAATGCCATTGCTCAGTCCAACCCAAACTACAATCCCAACATAGAGTGTGCAGACAGTGCCAGGACCGTTCGCATAGTCGCTTCCAAACAAACGGCCGTCACGCTTGGAAAAGAGTATCAGGGCCGTCAGATCAGCATCACAAATAATGCAGACCTTAGCATTGTTCAGACTGCATGGGGTGACAGTGGGGTGTACGTCTGCTCTGCTGCCTCAGCTCAGGACCTTTCGGGAAATGGAGAGTGTTACACAGAGCTCATTGTGCTTGGTAAGTGTTTATCTTATTATAAACAAACTCGATAGACACTTAAACATGTCAGATGCAATCACACACCTCGGTCAGATTGAGTTGTGATGAAAGATGTGTGGAGTAATGGCCTTGTAGTTAGTAGTTTAGTCATTAATAATTAGTATTTGTTGTATTAGTATTACTATTAAATCTTTATCTGtttgtgtgtccgtgtgtgttcatatttatttatttttcaccagTAAAAACTTCTGTTTGCTTGTGAAGGATTCAAGACTtatgaattaaagggatagttcaccc

Function

symbol description
lsr Acts upstream of or within endoderm development and pancreas development. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including EVL; Kupffer's vesicle; digestive system; pronephros; and sensory system. Orthologous to human LSR (lipolysis stimulated lipoprotein receptor).

GO:

id name namespace
GO:0007492 endoderm development biological_process
GO:0031016 pancreas development biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050913-73 Acts upstream of or within endoderm development and pancreas development. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including EVL; Kupffer's vesicle; digestive system; pronephros; and sensory system. Orthologous to human LSR (lipolysis stimulated lipoprotein receptor).

Ensembl:

ensembl_id ENSDARG00000099291

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018436 False 4509 mRNA 0.42 11 33937756 33965440
TCONS_00018437 False 2588 mRNA 0.47 10 33939065 33964900
TCONS_00018438 False 2621 mRNA 0.48 10 33939069 33964922
TCONS_00018439 False 722 mRNA 0.48 5 33951892 33964897
TCONS_00018440 True 910 lncRNA 0.43 3 33957926 33964911

Neighbor

gene id symbol gene type direction distance location
XLOC_009378 mag coding downstream 3936 33891808 ~ 33933820 (-)
XLOC_009376 CR855379.2 coding downstream 50089 33868661 ~ 33887667 (-)
XLOC_009377 NA coding downstream 60425 33869579 ~ 33877331 (-)
XLOC_009375 mmp13b coding downstream 103179 33825750 ~ 33834577 (-)
XLOC_009374 n4bp2l2 coding downstream 118884 33809864 ~ 33818872 (-)
XLOC_009380 si:dkey-30e9.7 coding upstream 29135 33994575 ~ 34056879 (-)
XLOC_009381 etv1 coding upstream 206931 34172371 ~ 34214440 (-)
XLOC_009382 dgkb coding upstream 250356 34215796 ~ 34326461 (-)
XLOC_009383 FP017158.1 coding upstream 313981 34279421 ~ 34279535 (-)
XLOC_009384 agmo coding upstream 369282 34334722 ~ 34418525 (-)
XLOC_009371 NA non-coding downstream 256078 33665924 ~ 33681678 (-)
XLOC_009370 CT027778.1 non-coding downstream 274584 33663055 ~ 33663172 (-)
XLOC_009367 NA non-coding downstream 1119761 32813736 ~ 32817995 (-)
XLOC_009389 NA non-coding upstream 637082 34602522 ~ 34607406 (-)
XLOC_009404 CR848683.2 non-coding upstream 1449026 35414466 ~ 35661368 (-)
XLOC_009405 CR848683.1 non-coding upstream 1475300 35440740 ~ 35468800 (-)
XLOC_009406 NA non-coding upstream 1648794 35614234 ~ 35675985 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01153123_00000135_00000461 LSR coding CI01153123 null 135 ~ 461 (-)