XLOC_009380 (si:dkey-30e9.7)


Basic Information

Item Value
gene id XLOC_009380
gene name si:dkey-30e9.7
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 33994575 ~ 34056879 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018441
CGAGATGCTTCAGCGGGAGGAGGTGTGTGTGGTCTGGACAGCAGCCCATGAAACACTCGCTGTTTGCCTCAAGACCGCTAAAGACATATCAAATATTTCTTTGCCAGCTTTCAGTTCGcgatttaacttattttgttcCGTATTATCGCTTCGGACACCCCATGAACGTTTTCCTTAAAGGATTTAAATAAGGAAATGCATCTAAACGTGAATGTGGAGTATTGCCTCgctattatatttattgttgtaaAAACTGTCAGCTGTCAGAAAGCGGACCCCCCTGAATGCAGTCAAGGTGGCCATACTGTTCTTCAGAGCCCATACAGGAGCACCAGCTTCAGCTCACAGCAGCTGCTCCAGTCTGCCATGCAGGAGCTCATTTGTGATCATTCACTCTCTCCCGGATGGTATCAGTTCCAGATCTTTGATAAGCCGGCCCGTATGCCCACCAAATGTGTGGAGGTGAATCAATGTGGAACACAAGCCCCAGTGTGGCTTTCTCTGTCTGATGGAGAGTCTCTGCCAGGCTTTCTAGAGGTGAAGCAGATGACAGCCTGTGCTACCTGGCAGTTTCTGGGAAGCGGCAGTAAAGATTGTTGCCTTTTTCGCTTGCCTGTCATCGTACGCAACTGTGGGAACTTCTATGTGTATTTGCTCCAACCAACACAAGGATGCATGGGATATTGTGCTGAAGAGATATCAGATGCCAGTCAAACTGACTGTGAAGGCAAACCAAGGAATAGTGATGGAACTTGCAGTGATCCACAGCCCCCATCTGCTGCAGTACCATTAATAGTATCTGAGCTTTTGGGCAGCAGTGTGTACCTGAGGTGTACGTTTGCTGACAGTAATGCAACCAGCTCTATGGGATATATTGTGACATGGTGGCGACTCTCTCCCGAGGGCAACAGAGAAGAGCTCAGGACAGACACTACAATAGAAACCTTCGCTTTCATTGAGCTGGATGGCATCAACCTGCGACTGGGAGACAGAGTCCATTGCAGTTGCATTAGCTTTTTTCTGGAGTCTCCTGATATACAAAGCCTTCCATTGGAGAGTGAAGAGTTTTATGTAGGAATTCAGATGAAGCCACAATCCGTCTTTATTTCGGAAGATGGGAAAGAGTATAAACTGACGGTGGAGAGCACTGTGCCTTTACCATGCTCCTTGGAGAGATGTGTTTTACCTTTGCATCTTACTACAAGTAGTCAAGGTGAGAAGGAGCTGGGTGTTGATTTAGTCCTGTCCTCCTGTGAAGTCGAGCTTTCTCAAATCCCATGTAATGAAGGTGTGTGTAGTCGAGCATCTGTCCTCTACAGCGCAGTGACGGATATATGGAGGGATGGAAACAGAAGCACTGAAATACACATTAAACCCATAATCAGCACCAACTTCCTGTGGAATGGATACACTCCTCAAAGTGTGCAGATTCTTGTGCAGGATGTCCCATCTGCTCACTGTTACACTTTTACGGATCCTCATATCATTACATTTGACGGCAGGAGGTATGATAACTATCAGATCGGTACATTTGTGTTGTACTGGAGCACCGGTCGGCCATTTGAGGTGCATGTTCGACAGTGGGAATGTGCCGGCAGGACTGCTCATCCCACCTCATGTGTCTGTGGCTTCGCTGTCAGAGACGGACCGCACGTCATCACATATGACATGTGTAATGGACTGGCAGGAGAAACGAAACCACGGCTCTCTGTGAAGAACGGAGACATGGAAAAAAGTGGCATCCGTGTCTTTGAGTCCTACCAGGGCCGCAAAGTCACTGTTACGTTCTTGTCTGGGGCTTTTGTGCGTGCTGATGTGGCTGACTGGGGAATTAGTGTGACTGTACGGGCTCCGGGCTCTGATAAAGGACACACCGAAGGCCTGTGCGGGACCTTTGATGGACAGTCGATGAATGACTACCATACAAAAGGTGGAGAGACTGTGGAGGACAGTAGATCTTTTATCAATGCATGGAGGTTGGCCCCCAGAACAAGCTTGTTTGACAAAATCCCGATCAATGCAAGCAACTCCAGTCTGCATAATTACTGCCAATGTCAGCAAGAGAAACACCAATCATCCGACTCTTCCTCAAAGTGTTCATTATCCACCCTCAGCCGCTATTCCTCCATCATCCCTGCAATGGACGTCACATCCCAATACATCAGAACCACTCACAGCAGGCCTGTCCAACACCGTCCATCCCAGGGAAGCAGATACCAAATCCACAGACGCATCACAAATCCCCAAAGACCCCACAATCAAAGACGTGTCGTAAACCCAAACAGATCTCAAAAACGTCAGAAACGCCAGAGCCGCCAATTCCACTCTAGATCTTCTCCAAACCTCCAGGAGTCTGCATATAATTTCCCAGAAGACCATTCTTTGTGGGTTTCTCCTGATGCGCTGGTGTTTTCCTGGCCTACTGAATCAGGTCTGACTGAACGTGAGGCTCGGAGGCTCTGCGAGAGCACTTTGAGGAACTCCACGGTTGGTTCTGGTTGCTGGAGTCTGCTAGGTAAGGTGATTGAGCCGGCGGTGGAGATGTGTGTGGTCGACCTGCAGCTTAAAGACGACCAGGCCTGGGTTGGAGCCACTGTAGCGTTGCTGGAGAATGAATGTGAGAGGAGGCTGCTAGAGGAGGTCAAGTGGAGGAAGGAGAACAGGGATGTTCTGGTTTCACTGAAGTGTCCCAGCCTGTGTAGTGGGAATGGACAGTGCACAGATTGGGGATGCTCGTGCTTCCCTGGGTTTGGATCCTTTGATTGCAGCCAAATAtccgATGAGACTCCAGAGATTACCGAACTGGAGAATGGAGGACTTTGTGATGTCCAGTATGGAGTCTGTTCATCTGTTAAAGTTTTTGGTCAAGGATTTAAAAAGTCCTACAAGCTCAAGTGTGAAGTTGTGAAGGAAAAGATAGTAGATAGCGAATGGTCTTTGGATGATGCCCGACTGGTGCCAGCCTCTTTCCAGAGTTCATCAGCATTAGAGTGCCAGATCCCTGCAGATCCCTCCACCACCGCACACCAACCAGTCCTACGCTGGCAAATCAAGGTGTCTAATGATGGACACAGCTTCAGCAATGCAAAGATTTTGACTCTTTTTGATGGGACATGTCAGATTTGCACAGTCAGCTCCACGGTTATCTGCACACTAAAGAACAGAACGTGTAGTATTGACGGAGTGTGTTTTGGAGAGGGAGATCACAGCCCAAACAGCCCGTGTTTGACGTGCAGACCGGATCTTTCCAAATACAGCTGGTCCATCGCTGAGAAAAACGAGCCGCCTGTGTTTCACCCGGGTCAATCCACTCTGAAGGCTTTCTCCGGAGAGGATTTCGTCTATCAGTTTTCAGCATCTGATCCGGAGGGCTCTGCGGTTTTCTTCACGCTCCGCTCAGGGCCCAGGGATGCGCTTCTCTCTCCAGCTGGTCTGCTCATCTGGAAAGCTCTGTCCAGCACACCGGTGACCTTAGACCTGGCTGTAACTGATGACTGTAATGCTGTGACACAAGCAGCAGTGAAGGTGTCAGTTGACCCATGTGACTGTCAGAATGGAGCGTCCTGTGTGACCAACATGAACTTCCCCCCGGGGTCTGGTGAATACCTGTGTGTTTGTCCTGTTGGTCTGGAGGGGCTCAAGTGTGAAACCGATGTGGATGACTGCAGGTCAAACCCGTGTCTCTCAGGAACTTGTGTGGATGCATTAAACTCCTTTACCTGCCAGTGTTCAGAGGGCTTTACAGGTGTGATCTGCGATGAGGATATTGATGAATGTTTATCATCTCTATGTTACTCTGGGGTTTCCTGCAGAAACACGGTGGGCTCGTTTGTGTGTGGACCCTGTCCTGACCAACTCATTGGAGATGGGATGACCTGCAAACaaaaGACAGTGGACAAAATTAATGAAGGCACACATGAAATCACCTTAGAAAGTGTGGTTAAACTCAACTCCTTCAAACCCAAGCTTATACCagGCAAGAGCCCATGTACCAGTCGGCCCTGTTACCCTGGAGTCCAGTGTTTCGAGAGCACATACACCTCTGCTGGATACATTTGTGGTCCATGTCCACCTGGACTCAACGGCAATGGACAAACATGCATGTCAAGGACAGCAAACAGGCAGACTCCATTAAAGGAGGACGGCAAGCTCTCTGATGTCACTTCCTCTTTGGTCACGCCTTATTCCACCAGAAAGTCAGCTGAATTTCATGCTGAAGCGGACAGATCTTCTGCCAGCAGCAGGTGGAGCTCACCTGTTGATAGAAGGACCATCACAAACTTAGACCGGAGCACCACAAAAACTAAAGACAACCAAAGTTCAACCAGTAAGCAGTCACATGAAGAGGAGTTAAACCCTAAAGACAACCGAACGTGTGTGGATTCACCCTGTTTCTCTGGTGTGGTGTGTGACGACACTTCCTCTGGCTCCTTCAGATGTAGAGACTGTCCAAATGGATATGAAGGAAACGGAATAACTTGCAAGCCAACATGCCGTTATCCTTGCGGTCAGAATATGGAGTGCTCACAGCCAAACACGTGTACCTGTAAAGAGGGTTACACTGGATACAACTGCCATATCGCCGTGTGTCGACCAGACTGCAAAAACAAAGGAAAGTGTGTAAAGCCCAGCGTGTGTGAATGTCCTTTAGGATACAGCGGACAAACCTGTGAGGAAGCCATCTGTGATCCGCCTTGTCAACATGGTGGCCGATGTTTGTCCAGAAATCACTGCACTTGTCCATATGGCTATGTGGGACCGAGATGTGAAACTATGGTGTGCAACAGACATTGTGAAAATGGTGGAGAGTGTGTGTCTCCTGATGTCTGCAAGTGTAAACCTGGCTGGTATGGACCGACATGCAACTCAGCCGACTGTAAGCCAGTGTGTTTAAACGGAGGGACATGTCTGAAACCAAATGTATGTGTTTGCCCCAGTGGCTTCTATGGTTCACAATGCCAGATAGCTCTTTGCAATCCGCCATGTAAAAACAGAGGCCAGTGTATGAGAAACAACGTTTGCTCCTGTCCTGAAGGATACACTGGGAAGAGATGCCAGAAAAGTGTGTGTGACCCCATGTGCTTGAACAACGGGAAGTGTGTCGGCCCAAACACCTGTTCCTGTCCATCTGGATGGAGAGGAGGGATTTGCAACATCcctgtgTGTTTACAGAAATGCAGGAATGGTGGAGAGTGTGTTGGGCCGAACACCTGCCACTGTCCAGCTGGATGGGAGGGTTGGCAGTGCCAAACTCCGATCTGTAAGCAAACATGCCTGAATGGAGGCAGATGTGTGTTCCCTAATTTCTGCCATTGCCGTCAAGGTTACACTGGACCTTCTTGTGGCACTAAAaCCAGGTGATGAAGACGTGACATTGAAGAGATATATATAAGAAATTGAAATGCTGTTTATGAGTAAATGCTGTTGTATTTGTGccctaaaagtaaagtaaagcttatttttagggtttttttaCCTTAGATTACTACAGTGTTTCATGAGTAATGTGTGTTGGTTTTTAAATGTCGCATAGCTCTGAAAATGAAtgctttttgtttaattgttggtTTAGTGTGCCTTTTCTcaataaaaagaaaagtgtttgaccacaaaaa
>TCONS_00018442
GCCATCTGTGATCCGCCTTGTCAACATGGTGGCCGATGTTTGTCCAGAAATCACTGCACTTGTCCATATGGCTATGTGGGACCGAGATGTGAAACTACCGACTGTAAGCCAGTGTGTTTAAACGGAGGGACATGTCTGAAACCAAATGTATGTGTTTGCCCCAGTGGCTTCTATGGTTCACAATGCCAGATAGGTGTGTGTGACCCCATGTGCTTGAACAACGGGAAGTGTGTCGGCCCAAACACCTGTTCCTGTCCATCTGGATGGAGAGGAGGGATTTGCAACATCcctgtgTGTTTACAGAAATGCAGGAATGGTGGAGAGTGTGTTGGGCCGAACACCTGCCACTGTCCAGCTGGATGGGAGGGTTGGCAGTGCCAAACTCCGATCTGTAAGCAAACATGCCTGAATGGAGGCAGATGTGTGTTCCCTAATTTCTGCCATTGCCGTCAAGGTTACACTGGACCTTCTTGT
>TCONS_00018443
AGATATCAGATGCCAGTCAAACTGACTGTGAAGGCAAACCAAGGAATAGTGATGGAACTTGCAGTGATCCACAGCCCCCATCTGCTGCAGTACCATTAATAGTATCTGAGCTTTTGGGCAGCAGTGTGTACCTGAGGTGTACGTTTGCTGACAGTAATGCAACCAGCTCTATGGGATATATTGTGACATGGTGGCGACTCTCTCCCGAGGGCAACAGAGAAGAGCTCAGGACAGACACTACAATAGAAACCTTCGCTTTCATTGAGCTGGATGGCATCAACCTGCGACTGGGAGACAGAGTAccctttttatatttataattcacATCGATTCAGTTTCACATCCTTGATTCTTAACCTGGGTTTCTATGTGTCTCAGGTCCATTGCAGTTGCATTAGCTTTTTTCTGGAGTCTCCTGATATACAAAGCCTTCCATTGGAGAGTGAAGAGTTTTATGTAGGAATTCAGGTACGTTTCAGTTCTTATACAGTTACATATTTCAATGAGAAGGTATGAGACTTAAAATTTGTGTGCATGTTTTCCAGATGAAGCCACAATCCGTCTTTATTTCGGAAGATGGGAAAGAGTATAAACTGACGGTGGAGAGCACTGTGCCTTTACCATGCTCCTTGGAGAGATGTGTTTTACCTTTGCATCTTACTACAAGTAGTCAAGGTGAGAAGGAGCTGGGTGTTGATTTAGTCCTGTCCTCCTGTGAAGTCGAGCTTTCTCAAATCCCATGTAATGAAGGTGTGTGTAGTCGAGCATCTGTCCTCTACAGCGCAGTGACGGATATATGGAGGGATGGAAACAGAAGCACTGAAATACACATTAAACCCATAATCAGCACCAACTTCCTGTGGAATGGATACACTCCTCAAAGTGTGCAGATTCTTGTGCAGGATGTCCCATCTGCTCACTGTTACACTTTTACGGATCCTCATATCATTACATTTGACGGCAGGTAGAAGCTCTGCCAttctcaaaaatgtacatttaacgTATTTAAATGCATACTTTTCAATGCAAATGTACATCAATTatgattgtgtgtttgttggcAGGAGGTATGATAACTATCAGATCGGTACATTTGTGTTGTACTGGAGCACCGGTCGGCCATTTGAGGTGCATGTTCGACAGTGGGAATGTGCCGGCAGGACTGCTCATCCCACCTCATGTGTCTGTGGCTTCGCTGTCAGAGACGGACCGCACGTCATCACATATGACATGTGTAATGGACTGGCAGGAGAAACGAAACCACGGCTCTCTGTGAAGAACGGAGACATGGAAAAAAGTGGCATCCGTGTCTTTGAGTCCTACCAGGGCCGCAAAGTCACTGTTACGTTCTTGTCTGGGGCTTTTGTGCGTGCTGATGTGGCTGACTGGGGAATTAGTGTGACTGTACGGGCTCCGGGCTCTGATAAAGGACACACCGAAGGCCTGTGCGGGACCTTTGATGGACAGTCGATGAATGACTACCATACAAAAGGTGGAGAGACTGTGGAGGACAGTAGATCTTTTATCAATGCATGGAGGTTGGCCCCCAGAACAAGCTTGTTTGACAAAATCCCGATCAATGCAAGCAACTCCAGTCTGCATAATTACTGCCAATGTCAGCAAGAGAAACACCAATCATCCGACTCTTCCTCAAAGTGTTCATTATCCACCCTCAGCCGCTATTCCTCCATCATCCCTGCAATGGACGTCACATCCCAATACATCAGAACCACTCACAGCAGGCCTGTCCAACACCGTCCATCCCAGGGAAGCAGATACCAAATCCACAGACGCATCACAAATCCCCAAAGACCCCACAATCAAAGACGTGTCGTAAACCCAAACAGATCTCAAAAACGTCAGAAACGCCAGAGCCGCCAATTCCACTCTAGATCTTCTCCAAACCTCCAGGAGTCTGCATATAATTTCCCAGAAGACCATTCTTTGTGGGTTTCTCCTGATGCGCTGGTGTTTTCCTGGCCTACTGAATCAGGTCTGACTGAACGTGAGGCTCGGAGGCTCTGCGAGAGCACTTTGAGGAACTCCACGGTTGGTTCTGGTTGCTGGAGTCTGCTAGGTAAGGTGATTGAGCCGGCGGTGGAGATGTGTGTGGTCGACCTGCAGCTTAAAGACGACCAGGCCTGGGTTGGAGCCACTGTAGCGTTGCTGGAGAATGAATGTGAGAGGAGGCTGCTAGAGGAGGTCAAGTGGAGGAAGGAGAACAGGGATGTTCTGGTTTCACTGAAGTGTCCCAGCCTGTGTAGTGGGAATGGACAGTGCACAGATTGGGGATGCTCGTGCTTCCCTGGGTTTGGATCCTTTGATTGCAGCCAAATAtccgATGAGACTCCAGAGATTACCGAACTGGAGAATGGAGGACTTTGTGATGTCCAGTATGGAGTCTGTTCATCTGTTAAAGTTTTTGGTCAAGGATTTAAAAAGTCCTACAAGCTCAAGTGTGAAGTTGTGAAGGAAAAGATAGTAGATAGCGAATGGTCTTTGGATGATGCCCGACTGGTGCCAGCCTCTTTCCAGAGTTCATCAGCATTAGAGTGCCAGATCCCTGCAGATCCCTCCACCACCGCACACCAACCAGTCCTACGCTGGCAAATCAAGGTGTCTAATGATGGACACAGCTTCAGCAATGCAAAGATTTTGACTCTTTTTGATGGGACATGTCAGATTTGCACAGTCAGCTCCACGGTTATCTGCACACTAAAGAACAGAACGTGTAGTATTGACGGAGTGTGTTTTGGAGAGGGAGATCACAGCCCAAACAGCCCGTGTTTGACGTGCAGACCGGATCTTTCCAAATACAGCTGGTCCATCGCTGAGAAAAACGAGCCGCCTGTGTTTCACCCGGGTCAATCCACTCTGAAGGCTTTCTCCGGAGAGGATTTCGTCTATCAGTTTTCAGCATCTGATCCGGAGGGCTCTGCGGTTTTCTTCACGCTCCGCTCAGGGCCCAGGGATGCGCTTCTCTCTCCAGCTGGTCTGCTCATCTGGAAAGCTCTGTCCAGCACACCGGTGACCTTAGACCTGGCTGTAACTGATGACTGTAATGCTGTGACACAAGCAGCAGTGAAGGTGTCAGTTGACCCATGTGACTGTCAGAATGGAGCGTCCTGTGTGACCAACATGAACTTCCCCCCGGGGTCTGGTGAATACCTGTGTGTTTGTCCTGTTGGTCTGGAGGGGCTCAAGTGTGAAACCGATGTGGATGACTGCAGGTCAAACCCGTGTCTCTCAGGAACTTGTGTGGATGCATTAAACTCCTTTACCTGCCAGTGTTCAGAGGGCTTTACAGGTCAATTCCTTTAA
>TCONS_00018444
CAAGAAGTGATATAAATGACGCCAGAATTAGCTTACAAATGCGTCAAAAACACTTagttaattgaacattttattggattttcttttttttatttgggttAAAATGTGTGCGTGATATTAAGCAGCGGAGAACCGACCAGTCAGCCCGAGATGCTTCAGCGGGAGGAGGTGTGTGTGGTCTGGACAGCAGCCCATGAAACACTCGCTGTTTGCCTCAAGACCGCTAAAGACATATCAAATATTTCTTTGCCAGCTTTCAGTTCGcgatttaacttattttgttcCGTATTATCGCTTCGGACACCCCATGAACGTTTTCCTTAAAGGATTTAAATAAGGAAATGCATCTAAACGTGAATGTGGAGTATTGCCTCgctattatatttattgttgtaaAAACTGTCAGCTGTCAGAAAGCGGACCCCCCTGAATGCAGTCAAGGTGGCCATACTGTTCTTCAGAGCCCATACAGGAGCACCAGCTTCAGCTCACAGCAGCTGCTCCAGTCTGCCATGCAGGAGCTCATTTGTGATCATTCACTCTCTCCCGGATGGTATCAGTTCCAGATCTTTGATAAGCCGGCCCGTATGCCCACCAAATGTGTGGAGGTGAATCAATGTGGAACACAAGCCCCAGTGTGGCTTTCTCTGTCTGATGGAGAGTCTCTGCCAGGCTTTCTAGAGGTGAAGCAGATGACAGCCTGTGCTACCTGGCAGTTTCTGGGAAGCGGCAGTAAAGATTGTTGCCTTTTTCGCTTGCCTGTCATCGTACGCAACTGTGGGAACTTCTATGTGTATTTGCTCCAACCAACACAAGGATGCATGGGATATTGTGCTGAAGGCAAGTCAGTGTACACTTTTGAGTATTGAAAACTGTGatattcactttttaagtatGATTATTGTGCATCA

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-131121-540 Predicted to enable calcium ion binding activity. Orthologous to human VWDE (von Willebrand factor D and EGF domains).

Ensembl:

ensembl_id ENSDARG00000101697

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018441 False 5615 mRNA 0.48 33 33994575 34056733
TCONS_00018442 False 474 mRNA 0.51 5 33995921 34001000
TCONS_00018443 False 3321 mRNA 0.48 13 34010407 34051457
TCONS_00018444 True 911 mRNA 0.44 3 34052737 34056879

Neighbor

gene id symbol gene type direction distance location
XLOC_009379 lsr coding downstream 29135 33937756 ~ 33965440 (-)
XLOC_009378 mag coding downstream 60755 33891808 ~ 33933820 (-)
XLOC_009376 CR855379.2 coding downstream 106908 33868661 ~ 33887667 (-)
XLOC_009377 NA coding downstream 117244 33869579 ~ 33877331 (-)
XLOC_009375 mmp13b coding downstream 159998 33825750 ~ 33834577 (-)
XLOC_009381 etv1 coding upstream 115492 34172371 ~ 34214440 (-)
XLOC_009382 dgkb coding upstream 158917 34215796 ~ 34326461 (-)
XLOC_009383 FP017158.1 coding upstream 222542 34279421 ~ 34279535 (-)
XLOC_009384 agmo coding upstream 277843 34334722 ~ 34418525 (-)
XLOC_009385 meox2a coding upstream 371429 34428308 ~ 34478448 (-)
XLOC_009371 NA non-coding downstream 312897 33665924 ~ 33681678 (-)
XLOC_009370 CT027778.1 non-coding downstream 331403 33663055 ~ 33663172 (-)
XLOC_009367 NA non-coding downstream 1176580 32813736 ~ 32817995 (-)
XLOC_009389 NA non-coding upstream 545643 34602522 ~ 34607406 (-)
XLOC_009404 CR848683.2 non-coding upstream 1357587 35414466 ~ 35661368 (-)
XLOC_009405 CR848683.1 non-coding upstream 1383861 35440740 ~ 35468800 (-)
XLOC_009406 NA non-coding upstream 1557355 35614234 ~ 35675985 (-)

Expression


Co-expression Network