CI01000046_06980879_06985344 (PRKAR1A.S, PRKAR1AA, PRKAR1AB, PRKAR1A, PRKAR1B.S)


Basic Information

Item Value
gene id CI01000046_06980879_06985344
gene name PRKAR1A.S, PRKAR1AA, PRKAR1AB, PRKAR1A, PRKAR1B.S
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 6979911 ~ 6986604 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_06980879_06985344.mRNA
GAATAAATACGAGACAAACTTTGTTGTCATCCTTTCAAAACTACTGAAAATTATACCATTTTAAGATGAGTGATGATTATACCTCCCCTGGTATTACATTAAAGTATTTTTATTTAACTTTGAATGTGTCAAAGAAGAAAGAAAATGTATATTGTTTGATACAAACAATATCAACATTTTTATTTATTTTTTAATTAAAAATCAACAAAAATAAACCATGAAATATTTCTAAACCTTTTAACACCCCAAAATATTTTTTTTGTCAGGTCAACAACCCAAATACAATCCAGTATGCTTGCTAACTGCATGTGGCTAATACCTTTAGCATACAAATATATCAGACACCTAATTTTAAGAATTTCCATAACAATTTGGTCTGAAAGATTCAACAATACAAAATAATTTTTTGAATCTTGGTTTCTTTTGGTATTTAAAGTCTGCATGTAATGTAAAATTTACCCTATTTACTTGGTCAGTTACTAGTCTTGTGGTGAATAATTAATATATGGAAAAAAAAAAAAAAAAAAAGCAAGTTAATGCACAGGAAAAAAATCTTTAGTCTTTAGTCAGAATCTAAGAATTTGCTTCCCCCTGGAATGACGTTCCTTCTCTGATGACGTTAGTTTGACGGCATTGGCAGAACATCCTTTAACCACTTCCCTCCGAAGTGTCAGTCGGCTGCAAGCTCGAGGTGGTGAAGAAGGGGTGCTAAAATCAAGCCCCGCCCTCTATATGTCACATTAGTGAAGTTGTTTGCAACTTCTGGTTCATGTGGTTTTCACAATGAAATTAGTGAATTTAACTTATGGTATTACACTCTACTCTTAAGAGGCGTGGGTATCGTCAGATCTTCACATTTCACTGCAGCTAGTTGGTCTAATGAAATTTAGCTAAGGACTGGATTTGCTCCAGATTCCTTGGGTTTCATAAGCTGATGTGAATTGCATGTTGCAGGTCAGCAGGTCACCATGGCGTCCAGCAGTACGAGCAGCGAAGAAGAGAGGAGCTTGCGGGAGTGTGAGCGCTACGTGCAGAAGCACAACATCCAGCAACTGCTGAAGGAATGCATTGTGCAGCTGTGCACTGTCAGGCCTGAAAGGCCAATGCTTTTCCTCAAAGAGTGCTTCGAGAGGCTTGAGAAGGAGGAAGCTAAACAGATCAGCAGCCAGCAGAAGTCAAGCTCTCGCTCAGACTCCCGAGAAGATGAGGTCTCTCCTCCCATGAATCCTGTGGTTAAGGGTCGACGGCGCCGTGGTGCCATCAGTGCAGAGGTGTACACTGAGGAAGATGCAGCTTCTTATGTCAGAAAGGTTATTCCTAAAGACTATAAAACGATGGCTGCCCTTGCTAAAGCGATTGAAAAGAATGTGCTTTTTGCCCATCTTGATGACAATGAAAGAAGTGACATATTTGATGCTATGTTCTCAGTCACCTACATTGCAGGAGAGACTGTCATTCAACAAGGGGATGAGGGTGACAATTTTTATGTTATTGATCAAGGTGAAATGGATGTGTACGTCAACAATGAGTGGGTGACCAGTATTGGAGAGGGTGGCAGTTTTGGTGAGCTGGCTTTAATCTACGGCACTCCCAGAGCAGCCACTGTCAGAGCAAAGACCAATGTCAAGCTATGGGGAATTGACAGAGACAGCTACAGGAGAATACTCATGGGAAGTACTCTAAGAAAGAGAAAAATGTATGAGGAATTCCTTAGCAAGGTTTCCATTTTGGAGTCTCTGGATAAATGGGAAAGGTTGACGGTTGCTGACGCCCTCGAGACAGTCCAGTTTGAAGATGGCCAGAAGATTGTTGTGCAGGGTCAACCAGGAGATGAGTTTTTCATTATCCTTGAGGGCTCGGCAGCAGTCCTGCAGCGGCGGTCGGAGAATGAGGAATTTGTGGAGGTCGGAAGACTCGCACCGTCTGACTACTTCGGTGAGATCGCTCTGCTCATGAACCGGCCTCGTGCCGCCACCGTGGTTGCTCGCGGCCCTCTGAAGTGCGTAAAACTTGACCGTCCCAGGTTCGAACGCGTGCTCGGCCCCTGCTCAGATATCCTGAAGAGAAACATACAGCAGTACAACAGCTTTGTGTCTCTGTCGGTCTGAGGCGCACTAGGCTCTTTCCTCCTTAATTGCAGGGTCCACCAATGCAAATTCGCTTTATTTTCTTACTTTTCTTTATGTTTTCCAACACCCAGGTGCCCATTCACTTCAGTGTTCTCTCTCTGTCTGTTTTTTTTTTTTTTTTTTTCGATTTGTGCCGTACCATGTCGCATTTGTATCCATCCTAGATTTACCATAAGGCTGATTGTTAGTTTTGCCTGAGAAACGAGCCAATCATTGTGCCACAGATGCCTGTCACATGAACAGATGTTGAAATAACAAGGTCTATCGGGATTTTCTCTCGCGTCCAAATTGCTTCATGTTTCTGTATACAGTGTTTAGAATGAAAGGAAAACTGGCAGGATTGATATACTCATTAAGTGTATTTACTCAGTATATAAGGATGTATCTTAATTGAGCCATCGAGTTTCAGATTCAGTTTTCCCTCGTCATTTCAAGCGTTTGAATATAGGGAAGCCAAAGGCATAAATCCATGTGTGTTATATTGTTTTCTTGGAGGTACTGAAGTTAAAATGTCACCGTGTTTATCATGGTGATCAGCTTTGCTCTTTTATTGTTATAGCTGCACATATATAGTGTATGTAAAAGATTATATATTAGAAGTAAATGACCATAACCATATTTTTTTGCACAGTTTGATATCTATATATACGTATATATATATAAAAAACACTTTATATACGCCTGCTGTTTTTCATTGTGGCATTTGCATTGGGCTTTTTTCACTTTCTGTTGGACGTTTTGTTCTCCTTTTGTCCTTAATGCTATACACAAAGGCTTGCTCTGGACTCCTATGTGGAGTAGACTAGGATTAGTCAAATCTCCTTTTAAAGTTTTTTTTTTTGTTTGTTTGTTTTTGTTTTTGTTGTTTAGCATTTTCTCCCTTCTAAAATGCCACATGCTGCAAATGCTTTTATTTGTTTGTTTCCCCCACCAAAGGTGAAGTAATATTATTTTATTCAGCATTGTGTTTATGGTGGATATAAAATCCAGAAAACAGGTTATATTTGTTGGTTTTGTTTAAATGTTAAGAAGAGTTACAGAAATGTAATGGTTAATGAAATCTGAAGTTTTGTTGACTGAGTATATGAGGATCCTCCTCAGCAGGAAGTGACTACTTGGTGACCTCCTTGACCCGCTGAGATCCAATTAGGTTTTCTTTCACAATGAGTGTATGTGAACTGCTTCGAAATCCCAAATGTCGTTTTTTTTTTTTTTACATTTTTAAACTGAATGTGGTTA

Function

symbol description
prkar1aa Predicted to enable cAMP binding activity; cAMP-dependent protein kinase inhibitor activity; and protein kinase A catalytic subunit binding activity. Predicted to be involved in negative regulation of cAMP-dependent protein kinase activity. Predicted to act upstream of or within phosphorylation and regulation of protein phosphorylation. Predicted to be located in plasma membrane. Predicted to be part of cAMP-dependent protein kinase complex. Predicted to be active in cytoplasm. Is expressed in early embryonic cell; immature eye; neural tube; and somite. Human ortholog(s) of this gene implicated in Carney complex; acrodysostosis; and primary pigmented nodular adrenocortical disease. Orthologous to human PRKAR1A (protein kinase cAMP-dependent type I regulatory subunit alpha).
prkar1ab Predicted to enable cAMP binding activity; cAMP-dependent protein kinase inhibitor activity; and protein kinase A catalytic subunit binding activity. Predicted to be involved in negative regulation of cAMP-dependent protein kinase activity. Predicted to act upstream of or within regulation of protein phosphorylation. Predicted to be located in plasma membrane. Predicted to be part of cAMP-dependent protein kinase complex. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in Carney complex; acrodysostosis; and primary pigmented nodular adrenocortical disease. Orthologous to human PRKAR1A (protein kinase cAMP-dependent type I regulatory subunit alpha).
prkar1a Enables cAMP-dependent protein kinase inhibitor activity; enzyme binding activity; and protein domain specific binding activity. Involved in negative regulation of activated T cell proliferation and negative regulation of cAMP-dependent protein kinase activity. Located in cytoplasm and plasma membrane raft. Part of nucleotide-activated protein kinase complex. Colocalizes with axoneme and immunological synapse. Implicated in Carney complex; acrodysostosis; and primary pigmented nodular adrenocortical disease.

GO:

id name namespace
GO:1903538 regulation of meiotic cell cycle process involved in oocyte maturation biological_process

KEGG:

id description
K04739 PRKAR; cAMP-dependent protein kinase regulator

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_06980879_06985344.mRNA True 3368 mRNA 0.40 10 6979911 6986604

Neighbor

gene id symbol gene type direction distance location
CI01000046_06920689_06937254 EZH1 coding upstream 41740 6920689 ~ 6938362 (+)
CI01000046_06850660_06870302 ABCC1 coding upstream 109573 6850660 ~ 6870338 (+)
CI01000046_06827772_06830465 NDE1 coding upstream 149446 6826520 ~ 6830465 (+)
CI01000046_06808895_06820945 GSPT1, ERF3B, GSPT1L coding upstream 158368 6808507 ~ 6821543 (+)
CI01000046_06794525_06807060 PDXDC1 coding upstream 172759 6794525 ~ 6807152 (+)
CI01000046_06989298_06993467 RAC3B, RAC3, RAC3A, RAC1, RAC1A, RAC1B, RAC3.S, RAC1.L coding downstream 2694 6989298 ~ 6994143 (+)
CI01000046_06997249_07006121 NA coding downstream 10645 6997249 ~ 7006274 (+)
CI01000046_07037314_07046456 CSNK1DB, CSNK1D coding downstream 50710 7037314 ~ 7046586 (+)
CI01000046_07052930_07054898 NA coding downstream 66326 7052930 ~ 7055025 (+)
G197792 NA non-coding upstream 28367 6951086 ~ 6951544 (+)
G197784 NA non-coding upstream 29868 6947318 ~ 6950043 (+)
G197787 NA non-coding upstream 79413 6899287 ~ 6900498 (+)
G197781 NA non-coding upstream 81893 6892149 ~ 6898018 (+)
G197528 NA other upstream 1237227 5726121 ~ 5742684 (+)
G197352 NA other upstream 1703458 5259318 ~ 5276453 (+)
G196869 NA other upstream 2558224 4415530 ~ 4421687 (+)
G197121 NA other upstream 2608481 4371011 ~ 4371430 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_026599 prkar1aa coding NC_007114.7 CM002887.2 36262593 ~ 36272670 (-)