XLOC_009382 (dgkb)


Basic Information

Item Value
gene id XLOC_009382
gene name dgkb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 34215796 ~ 34326461 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018448
ATGTCAAATGAAGAAAAGTGGGTCACTTTGAGTCCAAACGAATTCTCTCGTCTTCAGGACTATGCACAATacacaactaaaaaactaaaagatGTTCTCCAGGAGTTTCACGGAGGTGGGATTTTGGCCAAGTATAATCCTGAAGAGAAGCCGGAAATCCTCAATCAGGATTTTAAGGAGGGTTTTAAGCTCTTTATGGAGACGTTCCTGGAGAATGAACTTGACGAGGAGTTCTGTGAGCATCTCTTTCTCAGTTTCTGCAACAAAGACCCAAAGTCGAGCCCCTCCATGACAGAAAAGCAGAAAATCATGGGTCTGAAACTGATAAAGGGCAGCTGCCCACCCCTGAAGGTGACGTCCCAGTCCAGACCTCTCAGTACGGTCCAGCTGAAGGACATGATCTGCTACCTCTCTCTCTTGGAGGGCGGACGACCAGAAGACAAGCTAGAATTCATGTTTCGCCTGTATGACACAGATGGGAATGGGTTTTTGGACAGTAAGGAACTGGAGCACATTATCTCTCAAATGATGCATGTGGCAGAGTATCTGGAGTGGGACATCACAGAACTGAAGCCGATCTTGGAGGAGATGATGCAGGAGATTGACTATGATAATGATGGGATGGTTTCTCTGGAAGAGTGGCTCCAGGGCGGCCTGACCATCATTCCTCTGCTCGTTCTGCTGGGACTCGAAACTAATGTAAAGGACGACGGGCAGCACGTGTGGAGACTGAAGCACTTCAGTAAACCTGCCTACTGTAACCTGTGTCTGAATATGCTGATCGGATTGGGAAAACAAGGCCTCTGCTGCTCCTTCTGCAAGTACACGGTCCATGAGAGATGTGTGTCTCGAGCCCCCCCGTCCTGCATCAAAACATACGTCAAATCCAAGAAAAACACAGAGATTATGCATCATTTCTGGGTGGAAGGAAACTGTCCAAGCAAATGCGATAAATGTCACAAGACGATCAAGTGTTACCAGGGACTTACAGGCCTTCATTGTGTCTGGTGCCAGATTACTCTACACAACAAGTGCGCTTCACACGTCAAACCTGAATGTGACTGCGGGTCGCTGAGAGATCACATCCTTCCTCCAAACACAATATGCCCTGTTGTTCTGGTAATATCCCGTTTGCTTttgttatatacaGAGAGACAGTCTACTTTGAGGAAAGACTCCAACCAATCAGGAGGACGAACGAAAATACAGAGGACCAATTCAGTGTCAGTGGATGGACAGGGGCTACAGATTACACCATTAGAAGGAACTCATCCTCTGTTGGTTTTCGTCAACCCTAAAAGTGGAGGCAAACAAGGTGAAAGGATCTTCCGCAAGTTCCAGTACCTCCTAAACCCTCGTCAAGTCTACAACCTGACACTCTGCTGTCCTCTAGCATTTTCCCTCTCATTCAATGAAGTGCTTTTCTATTTCTTAGACAAAGCCAACTTTGAACAGAATCCTCCCGTGTGTGTACTTCCTCTCGGCACAGGAAATGACCTCGCAAGGTGTCTGCACTGGGGTGGAGGCTATGATGGAGAAAGTCTCCTGCAGATTCTGAAGGACGTCCAGGACAGCAGTGAGGTGATGCTGGACCGGTGGAAGATCAACATCACTCCTGTAGACCGAGATGAAGGTGGAGATCCCGTCCCGTACAGCATAATCAACAATTACTTCTCTATCGGTGTGGATGCATCCATCGCTCATCGCTTCCACATTATGAGAGAGAAGCATCCAGAAAGGTTTAACAGCAGGACAAAGAATAAGCTTTGGTACTTCGAGTTTGGGACCTCAGAAACCTTCTCAGCAACTTGCAAGAAGCTGCATGATTATCTTGAGGTGGAGTGTGATGGTATCACCCTGAATCTCAGCAACATCTCATTGGAAGGCATCGCCATCCTTAATATTCCCAGCATGCACGGAGGTTCCAACCTATGGGGAGAGAGTAAGAAACGGAGGGGCCATCGTCGAACTGGAAAAAAGTCTCCAGAAAAGAAAACCACAATTGTTGACCCCAAACAACTCCTTTTTGCTGTgcaagACCCATCAGATCAGCTGCTGGAGGTGGTGGGTCTGGAAGGAGCAATGGAAATGGGACAGATCTACACGGGGCTGAAGAGCGCAGGCAGACGACTGGCTCAGTGTTCATCTATCACTATCAGAACCAGTAAATCCCTCCCTATGCAAATAGATGGTGAGCCATGGATGCAGAGCCCATGCACTGTAAGTATGACCTGCACATTCAAACCACTGTTTctcaacatttttaaacttttcttttttatcaAAACAGGTCTCTCTTGCTATTATGGTTATTGA
>TCONS_00018449
ATGTCAAATGAAGAAAAGTGGGTCACTTTGAGTCCAAACGAATTCTCTCGTCTTCAGGACTATGCACAATacacaactaaaaaactaaaagatGTTCTCCAGGAGTTTCACGGAGGTGGGATTTTGGCCAAGTATAATCCTGAAGAGAAGCCGGAAATCCTCAATCAGGATTTTAAGGAGGGTTTTAAGCTCTTTATGGAGACGTTCCTGGAGAATGAACTTGACGAGGAGTTCTGTGAGCATCTCTTTCTCAGTTTCTGCAACAAAGACCCAAAGTCGAGCCCCTCCATGACAGAAAAGCAGAAAATCATGGGTCTGAAACTGATAAAGGGCAGCTGCCCACCCCTGAAGGTGACGTCCCAGTCCAGACCTCTCAGTACGGTCCAGCTGAAGGACATGATCTGCTACCTCTCTCTCTTGGAGGGCGGACGACCAGAAGACAAGCTAGAATTCATGTTTCGCCTGTATGACACAGATGGGAATGGGTTTTTGGACAGTAAGGAACTGGAGCACATTATCTCTCAAATGATGCATGTGGCAGAGTATCTGGAGTGGGACATCACAGAACTGAAGCCGATCTTGGAGGAGATGATGCAGGAGATTGACTATGATAATGATGGGATGGTTTCTCTGGAAGAGTGGCTCCAGGGCGGCCTGACCATCATTCCTCTGCTCGTTCTGCTGGGACTCGAAACTAATGTAAAGGACGACGGGCAGCACGTGTGGAGACTGAAGCACTTCAGTAAACCTGCCTACTGTAACCTGTGTCTGAATATGCTGATCGGATTGGGAAAACAAGGCCTCTGCTGCTCCTTCTGCAAGTACACGGTCCATGAGAGATGTGTGTCTCGAGCCCCCCCGTCCTGCATCAAAACATACGTCAAATCCAAGAAAAACACAGAGATTATGCATCATTTCTGGGTGGAAGGAAACTGTCCAAGCAAATGCGATAAATGTCACAAGACGATCAAGTGTTACCAGGGACTTACAGGCCTTCATTGTGTCTGGTGCCAGATTACTCTACACAACAAGTGCGCTTCACACGTCAAACCTGAATGTGACTGCGGGTCGCTGAGAGATCACATCCTTCCTCCAAACACAATATGCCCTGTTGTTCTGGAGAGACAGTCTACTTTGAGGAAAGACTCCAACCAATCAGGAGGACGAACGAAAATACAGAGGACCAATTCAGTGTCAGTGGATGGACAGGGGCTACAGATTACACCATTAGAAGGAACTCATCCTCTGTTGGTTTTCGTCAACCCTAAAAGTGGAGGCAAACAAGGTGAAAGGATCTTCCGCAAGTTCCAGTACCTCCTAAACCCTCGTCAAGTCTACAACCTGACACTCTGCTGTCCTCTAGCATTTTCCCTCTCATTCAATGAAGTGCTTTTCTATTTCTTAGACAAAGCCAACTTTGAACAGAATCCTCCCGTGTGTGTACTTCCTCTCGGCACAGGAAATGACCTCGCAAGGTGTCTGCACTGGGGTGGAGGCTATGATGGAGAAAGTCTCCTGCAGATTCTGAAGGACGTCCAGGACAGCAGTGAGGTGATGCTGGACCGGTGGAAGATCAACATCACTCCTGTAGACCGAGATGAAGGTGGAGATCCCGTCCCGTACAGCATAATCAACAATTACTTCTCTATCGGTGTGGATGCATCCATCGCTCATCGCTTCCACATTATGAGAGAGAAGCATCCAGAAAGGTTTAACAGCAGGACAAAGAATAAGCTTTGGTACTTCGAGTTTGGGACCTCAGAAACCTTCTCAGCAACTTGCAAGAAGCTGCATGATTATCTTGAGGTGGAGTGTGATGGTATCACCCTGAATCTCAGCAACATCTCATTGGAAGGCATCGCCATCCTTAATATTCCCAGCATGCACGGAGGTTCCAACCTATGGGGAGAGAGTAAGAAACGGAGGGGCCATCGTCGAACTGGAAAAAAGTCTCCAGAAAAGAAAACCACAATTGTTGACCCCAAACAACTCCTTTTTGCTGTgcaagACCCATCAGATCAGCTGCTGGAGGTGGTGGGTCTGGAAGGAGCAATGGAAATGGGACAGATCTACACGGGGCTGAAGAGCGCAGGCAGACGACTGGCTCAGTGTTCATCTATCACTATCAGAACCAGTAAATCCCTCCCTATGCAAATAGATGGTGAGCCATGGATGCAGAGCCCATGCACTGTAAAGGTTTAA
>TCONS_00018450
ATGTCAAATGAAGAAAAGTGGGTCACTTTGAGTCCAAACGAATTCTCTCGTCTTCAGGACTATGCACAATacacaactaaaaaactaaaagatGTTCTCCAGGAGTTTCACGGAGGTGGGATTTTGGCCAAGTATAATCCTGAAGAGGATTTTAAGGAGGGTTTTAAGCTCTTTATGGAGACGTTCCTGGAGAATGAACTTGACGAGGAGTTCTGTGAGCATCTCTTTCTCAGTTTCTGCAACAAAGACCCAAAgcacattcaaatcaagactaaaaacacatctgttcagTTGTGCCTTTACCGAATGAACACTGTGCTACGTCTGAAACATCCCATTATTTCCAGACCTCTCAGTACGGTCCAGCTGAAGGACATGATCTGCTACCTCTCTCTCTTGGAGGGCGGACGACCAGAAGACAAGCTAGAATTCATGTTTCGCCTGTATGACACAGATGGGAATGGGTTTTTGGACAGTAAGGAACTGGAGCACATTATCTCTCAAATGATGCATGTGGCAGAGTATCTGGAGTGGGACATCACAGAACTGAAGCCGATCTTGGAGGAGATGATGCAGGAGATTGACTATGATAATGATGGGATGGTTTCTCTGGAAGAGTGGCTCCAGGGCGGCCTGACCATCATTCCTCTGCTCGTTCTGCTGGGACTCGAAACTAATGTAAAGGACGACGGGCAGCACGTGTGGAGACTGAAGCACTTCAGTAAACCTGCCTACTGTAACCTGTGTCTGAATATGCTGATCGGATTGGGAAAACAAGGCCTCTGCTGCTCCTTCTGCAAGTACACGGTCCATGAGAGATGTGTGTCTCGAGCCCCCCCGTCCTGCATCAAAACATACGTCAAATCCAAGAAAAACACAGAGATTATGCATCATTTCTGGGTGGAAGGAAACTGTCCAAGCAAATGCGATAAATGTCACAAGACGATCAAGTGTTACCAGGGACTTACAGGCCTTCATTGTGTCTGGTGCCAGATTACTCTACACAACAAGTGCGCTTCACACGTCAAACCTGAATGTGACTGCGGGTCGCTGAGAGATCACATCCTTCCTCCAAACACAATATGCCCTGTTGTTCTGGAGAGACAGTCTACTTTGAGGAAAGACTCCAACCAATCAGGAGGACGAACGAAAATACAGAGGACCAATTCAGTGTCAGTGGATGGACAGGGGCTACAGATTACACCATTAGAAGGAACTCATCCTCTGTTGGTTTTCGTCAACCCTAAAAGTGGAGGCAAACAAGGTGAAAGGATCTTCCGCAAGTTCCAGTACCTCCTAAACCCTCGTCAAGTCTACAACCTGGCTAAAAGCGGCCCAATGCCTGGTTATAGAAGCTGTAGAACTGTGGAATATTATAAGACACTCTGCTGTCCTCTAGCATTTTCCCTCTCATTCAATGAAGTGCTTTTCTATTTCTTAGACAAAGCCAACTTTGAACAGAATCCTCCCGTGTGTGTACTTCCTCTCGGCACAGGAAATGACCTCGCAAGGTGTCTGCACTGGGGTGGAGGCTATGATGGAGAAAGTCTCCTGCAGATTCTGAAGGACGTCCAGGACAGCAGTGAGGTGATGCTGGACCGGTGGAAGATCAACATCACTCCTGTAGACCGAGATGAAGGTGGAGATCCCGTCCCGTACAGCATAATCAACAATTACTTCTCTATCGGTGTGGATGCATCCATCGCTCATCGCTTCCACATTATGAGAGAGAAGCATCCAGAAAGGTTTAACAGCAGGACAAAGAATAAGCTTTGGTACTTCGAGTTTGGGACCTCAGAAACCTTCTCAGCAACTTGCAAGAAGCTGCATGATTATCTTGAGGTGGAGTGTGATGGTATCACCCTGAATCTCAGCAACATCTCATTGGAAGGCATCGCCATCCTTAATATTCCCAGCATGCACGGAGGTTCCAACCTATGGGGAGAGAGTAAGAAACGGAGGGGCCATCGTCGAACTGGAAAAAAGTCTCCAGAAAAGAAAACCACAATTGTTGACCCCAAACAACTCCTTTTTGCTGTgcaagACCCATCAGATCAGCTGCTGGAGGTGGTGGGTCTGGAAGGAGCAATGGAAATGGGACAGATCTACACGGGGCTGAAGAGCGCAGGCAGACGACTGGCTCAGTGTTCATCTATCACTATCAGAACCAGTAAATCCCTCCCTATGCAAATAGATGGTGAGCCATGGATGCAGAGCCCATGCACTGTAAGTATGACCTGCACATTGCACTTCTTTTTATATTGTTCAATATATTTATTGCTACTAGTGTTCACTTTTTAG
>TCONS_00018451
ATGTTCAGCATCGCCTTCCACTATCACAACCCAGATCCACAGCCTGCTAAATAGCAAGATGGAGAGATGAAGGGGAAAACGAGGATGGGagggagtgtgtgtatgtatgtgtgtgtgagagagcacaGCCATGAAAACTGATTGTTGCAGATGAGtagatctctctctttctctccagcTCTCATGCTCATTTTCCCCGACACAAACAGTGCTGTTCTAACAGTAGGAGGCTTTTACTTGACGCCGCCAGTAATGGACGAATAAAAACACATAACATGCTCATCGCATCGCTGCTGTTGACTTGAAGCATCAGAGCCTGAGCTGGTGAATCTCATTGTAATGTAAACAGAGGCAGATAAACAGTGGCACAGCATGTCAAATGAAGAAAAGTGGGTCACTTTGAGTCCAAACGAATTCTCTCGTCTTCAGGACTATGCACAATacacaactaaaaaactaaaagatGTTCTCCAGGAGTTTCACGGAGGTGGGATTTTGGCCAAGTATAATCCTGAAGAGACGTTCCTGGAGAATGAACTTGACGAGGAGTTCTGTGAGCATCTCTTTCTCAGTTTCTGCAACAAAGACCCAAAGTCGAGCCCCTCCATGACAGAAAAGCAGAAAATCATGGGTCTGAAACTGATAAAGGGCAGCTGCCCACCCCTGAAGGTGACGTCCCAGTCCAGACCTCTCAGTACGGTCCAGCTGAAGGACATGATCTGCTACCTCTCTCTCTTGGAGGGCGGACGACCAGAAGACAAGCTAGAATTCATGTTTCGCCTGTATGACACAGATGGGAATGGGTTTTTGGACAGTAAGGAACTGGAGCACATTATCTCTCAAATGATGCATGTGGCAGAGTATCTGGAGTGGGACATCACAGAACTGAAGCCGATCTTGGAGGAGATGATGCAGGAGATTGACTATGATAATGATGGGATGGTTTCTCTGGAAGAGTGGCTCCAGGGCGGCCTGACCATCATTCCTCTGCTCGTTCTGCTGGGACTCGAAACTAATGTAAAGGACGACGGGCAGCACGTGTGGAGACTGAAGCACTTCAGTAAACCTGCCTACTGTAACCTGTGTCTGAATATGCTGATCGGATTGGGAAAACAAGGCCTCTGCTGCTCCTTCTGCAAGTACACGGTCCATGAGAGATGTGTGTCTCGAGCCCCCCCGTCCTGCATCAAAACATACGTCAAATCCAAGAAAAACACAGAGATTATGCATCATTTCTGGGTGGAAGGAAACTGTCCAAGCAAATGCGATAAATGTCACAAGACGATCAAGTGTTACCAGGGACTTACAGGCCTTCATTGTGTCTGGTGCCAGATTACTCTACACAACAAGTGCGCTTCACACGTCAAACCTGAATGTGACTGCGGGTCGCTGAGAGATCACATCCTTCCTCCAAACACAATATGCCCTGTTGTTCTGGAGAGACAGTCTACTTTGAGGAAAGACTCCAACCAATCAGGAGGACGAACGAAAATACAGAGGACCAATTCAGTGTCAGTGGATGGACAGGGGCTACAGATTACACCATTAGAAGGAACTCATCCTCTGTTGGTTTTCGTCAACCCTAAAAGTGGAGGCAAACAAGGTGAAAGGATCTTCCGCAAGTTCCAGTACCTCCTAAACCCTCGTCAAGTCTACAACCTGGCTAAAAGCGGCCCAATGCCTGGTTATAGAAGCTGTAGAACTGTGGAATATTATAAGACACTCTGCTGTCCTCTAGCATTTTCCCTCTCATTCAATGAAGTGCTTTTCTATTTCTTAGACAAAGCCAACTTTGAACAGAATCCTCCCGTGTGTGTACTTCCTCTCGGCACAGGAAATGACCTCGCAAGGTGTCTGCACTGGGGTGGAGGCTATGATGGAGAAAGTCTCCTGCAGATTCTGAAGGACGTCCAGGACAGCAGTGAGGTGATGCTGGACCGGTGGAAGATCAACATCACTCCTGTAGACCGAGATGAAGGTGGAGATCCCGTCCCGTACAGCATAATCAACAATTACTTCTCTATCGGTGTGGATGCATCCATCGCTCATCGCTTCCACATTATGAGAGAGAAGCATCCAGAAAGGTTTAACAGCAGGACAAAGAATAAGCTTTGGTACTTCGAGTTTGGGACCTCAGAAACCTTCTCAGCAACTTGCAAGAAGCTGCATGATTATCTTGAGGTGGAGTGTGATGGTATCACCCTGAATCTCAGCAACATCTCATTGGAAGGCATCGCCATCCTTAATATTCCCAGCATGCACGGAGGTTCCAACCTATGGGGAGAGAGTAAGAAACGGAGGGGCCATCGTCGAACTGGAAAAAAGTCTCCAGAAAAGAAAACCACAATTGTTGACCCCAAACAACTCCTTTTTGCTGTgcaagACCCATCAGATCAGCTGCTGGAGGTGGTGGGTCTGGAAGGAGCAATGGAAATGGGACAGATCTACACGGGGCTGAAGAGCGCAGGCAGACGACTGGCTCAGTGTTCATCTATCACTATCAG

Function

symbol description
dgkb Predicted to enable diacylglycerol kinase activity. Predicted to be involved in diacylglycerol metabolic process; intracellular signal transduction; and lipid phosphorylation. Predicted to act upstream of or within phosphorylation and protein kinase C-activating G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Orthologous to human DGKB (diacylglycerol kinase beta).

GO:

id name namespace
GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway biological_process
GO:0046834 lipid phosphorylation biological_process
GO:0035556 intracellular signal transduction biological_process
GO:0046339 diacylglycerol metabolic process biological_process
GO:0016310 phosphorylation biological_process
GO:0046486 glycerolipid metabolic process biological_process
GO:0007165 signal transduction biological_process
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0016740 transferase activity molecular_function
GO:0005509 calcium ion binding molecular_function
GO:0005524 ATP binding molecular_function
GO:0003951 NAD+ kinase activity molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0016301 kinase activity molecular_function
GO:0004143 diacylglycerol kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070126-1 Predicted to enable diacylglycerol kinase activity. Predicted to be involved in diacylglycerol metabolic process; intracellular signal transduction; and lipid phosphorylation. Predicted to act upstream of or within phosphorylation and protein kinase C-activating G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Orthologous to human DGKB (diacylglycerol kinase beta).

Ensembl:

ensembl_id ENSDARG00000027724

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018448 False 2316 mRNA 0.47 23 34215796 34322915
TCONS_00018449 False 2202 mRNA 0.48 23 34219789 34322915
TCONS_00018450 False 2301 mRNA 0.46 22 34220365 34322915
TCONS_00018451 True 2504 mRNA 0.48 21 34223249 34326461

Neighbor

gene id symbol gene type direction distance location
XLOC_009381 etv1 coding downstream 1356 34172371 ~ 34214440 (-)
XLOC_009380 si:dkey-30e9.7 coding downstream 158917 33994575 ~ 34056879 (-)
XLOC_009379 lsr coding downstream 250356 33937756 ~ 33965440 (-)
XLOC_009378 mag coding downstream 281976 33891808 ~ 33933820 (-)
XLOC_009376 CR855379.2 coding downstream 328129 33868661 ~ 33887667 (-)
XLOC_009384 agmo coding upstream 8261 34334722 ~ 34418525 (-)
XLOC_009385 meox2a coding upstream 101847 34428308 ~ 34478448 (-)
XLOC_009386 crppa coding upstream 168595 34495056 ~ 34568705 (-)
XLOC_009387 sostdc1a coding upstream 235736 34562197 ~ 34567370 (-)
XLOC_009388 ankmy2a coding upstream 246850 34573311 ~ 34590820 (-)
XLOC_009377 NA non-coding downstream 338465 33869579 ~ 33877331 (-)
XLOC_009371 NA non-coding downstream 534118 33665924 ~ 33681678 (-)
XLOC_009370 CT027778.1 non-coding downstream 552624 33663055 ~ 33663172 (-)
XLOC_009367 NA non-coding downstream 1397801 32813736 ~ 32817995 (-)
XLOC_009389 NA non-coding upstream 276061 34602522 ~ 34607406 (-)
XLOC_009404 CR848683.2 non-coding upstream 1088005 35414466 ~ 35661368 (-)
XLOC_009405 CR848683.1 non-coding upstream 1114279 35440740 ~ 35468800 (-)
XLOC_009406 NA non-coding upstream 1287773 35614234 ~ 35675985 (-)
XLOC_009407 NA non-coding upstream 1435220 35761681 ~ 35886373 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000095_02108777_02148734 DGKB coding CI01000095 null 2108777 ~ 2148734 (-)