G194727


Basic Information

Item Value
gene id G194727
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 464614 ~ 467283 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU221162
GAAAAAAAATCGATGCAGCATTTCAGACATGAAAGTGCTCATTGCTTGTGTCAATTTCAGTGAACGTGATAGTGATATAATTCAATCTTCTTCTGCGACCTGCACAATCTCAAGTTTGCAGAGAACACCACCCTGGTTGGTTCACCTGGTTTCAAACAGAGAAGAGTATAAGAGATAATAAGATTGGATTTGTGAACATGGAAAGTAACGAGCCTGCACACCTGGAAGTTAGTTTGTATTTGGTAGTATTTGGAATACTGACATTACTTGTGACAGTATTATCTGTGTTTAATGGTCTGAATTGCTGCCGAAAGAGAAAACGCCACAGAAATGAACCAAAGGAATATCCTCTTGAGTCAGTGAGGATGGACAGTAATAAGAAGCAAAAAGAATATCTGCTGACAGAAGAAACTGATGGTAAAATCACATGCAGTAAAAGTCTGTTTTCAATGTATCCACAATCAACACACTCTCATGAAAGGGGAACTTCAATGGGGAACTTTTTGCTTATATGCTGAAATGTTGCCATTGGCACATTTATTACATGTCAGTCTGATGACATTTTTAACTCATTTTGGAGCATCATTTCACGTTTCCCAAAGTAAAATGTTACATTTCAAGCTAGAATTGCCCAAATAAAAATGAATGAACACCGCACTTTTTCCATAAAACAACCACTTNNNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU221162 True 684 lncRNA 0.37 3 464614 467283

Neighbor

gene id symbol gene type direction distance location
CI01000046_00436111_00443677 NUDT6 coding upstream 19116 436111 ~ 446757 (+)
CI01000046_00107578_00163060 NA coding upstream 301479 104109 ~ 163135 (+)
CI01000046_00100813_00103411 LERL1, LEPROTL1.L, LEPROTL1 coding upstream 360530 100568 ~ 104084 (+)
CI01000046_00477221_00481241 NA coding downstream 9938 477221 ~ 481243 (+)
CI01000046_00492034_00493262 KIAA0141 coding downstream 24751 492034 ~ 493338 (+)
CI01000046_00494421_00496860 KIAA0141 coding downstream 27138 494421 ~ 496958 (+)
CI01000046_00499754_00526138 NA coding downstream 32471 499754 ~ 528550 (+)
CI01000046_00670755_00673139 NA coding downstream 203472 670755 ~ 673447 (+)
G194721 NA non-coding upstream 4269 458008 ~ 460345 (+)
G194750 NA non-coding upstream 39190 407504 ~ 425424 (+)
G194710 NA non-coding upstream 79574 384837 ~ 385040 (+)
G194706 NA non-coding upstream 87859 376552 ~ 376755 (+)
G194762 NA non-coding downstream 19650 486933 ~ 487340 (+)
G194779 NA non-coding downstream 120842 588125 ~ 588490 (+)
G194780 NA non-coding downstream 122287 589570 ~ 619405 (+)
G194803 NA non-coding downstream 194704 661987 ~ 664124 (+)
G195003 NA other downstream 693874 1161157 ~ 1161690 (+)
CI01000046_01540075_01668012 HS3ST4 other downstream 1072211 1539494 ~ 1668012 (+)
CI01000046_01865451_01881353 NA other downstream 1405512 1865451 ~ 1881369 (+)
CI01000046_02451052_02454565 MAFK other downstream 1972634 2442395 ~ 2457280 (+)
G196936 NA other downstream 2719712 3186995 ~ 3194271 (+)

Expression


Co-expression Network