G194823


Basic Information

Item Value
gene id G194823
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 799294 ~ 800928 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU221282
TGGGTCCTGGCTTTGTGGGAGCAGCAGCAGTGACTAGCTGAGTGGCAGGCATTACTCGACCATCTTCTACTGATGTTTTGCTCAGCAAGTCTGTGCACTGGAGTTTGGAGCCGACCGGAGGCGATACGGCGGATGGATCAGGCAGTCTGGCTTCTATAGGAGAAGATGCAGAGCCCTGAGACTCATGACTAGCCGGCTGCTCTGGAGACAGAGCTTCACTGCTGTCCTCATTGAAGTTATAAACATCCAGTTCACCAACAATCTCAACTGGCAGAATGTTCTTCTCCACCAGTTCCATTGGTCCCGGCCTCTGTGCAATCTTCTCATTGAGATCATCTGCTAGACGTGCCCTCTTTAGTTTCATCTGAGTGGCTTGCAAAGAAGGCTCTGCATGGGTTTCTGAAATACATAGAGCTTTAGAGCATCACAAATGAAGTATCCAGGAAGTGAAACGTTAAGTGCCTCAAAAAGTATAAGACCCTGACACACTCTTAAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU221282 True 498 lncRNA 0.49 3 799294 800928

Neighbor

gene id symbol gene type direction distance location
CI01000046_00784993_00786387 NA coding upstream 12214 784645 ~ 787080 (+)
CI01000046_00781088_00781355 CP033, SNRNP25 coding upstream 17939 781088 ~ 781355 (+)
CI01000046_00770575_00774675 CDIP1 coding upstream 23025 770575 ~ 776269 (+)
CI01000046_00670755_00673139 NA coding upstream 125847 670755 ~ 673447 (+)
CI01000046_00499754_00526138 NA coding upstream 272236 499754 ~ 528550 (+)
CI01000046_00893353_00931079 SHISA9B coding downstream 92371 893299 ~ 932443 (+)
CI01000046_01026787_01028640 IGFALS coding downstream 225574 1026502 ~ 1028869 (+)
CI01000046_01067894_01070331 H3F3AP4, H3F3C, H3F3B, H3F3A, GM6421 coding downstream 266008 1066936 ~ 1070777 (+)
CI01000046_01149090_01159654 NA coding downstream 348008 1148936 ~ 1160102 (+)
CI01000046_01246234_01251650 NA coding downstream 444804 1245732 ~ 1251689 (+)
G194719 NA non-coding upstream 8605 735070 ~ 790689 (+)
G194716 NA non-coding upstream 39604 687004 ~ 759690 (+)
G194734 NA non-coding upstream 55380 722652 ~ 743914 (+)
G194810 NA non-coding upstream 114699 683788 ~ 684595 (+)
G194739 NA non-coding upstream 116616 681703 ~ 682678 (+)
G194964 NA non-coding downstream 224905 1025833 ~ 1026053 (+)
G194968 NA non-coding downstream 235625 1036553 ~ 1036803 (+)
G194977 NA non-coding downstream 271397 1072325 ~ 1072586 (+)
G194979 NA non-coding downstream 272457 1073385 ~ 1073664 (+)
G194987 NA non-coding downstream 285239 1086167 ~ 1086399 (+)
G194721 NA other upstream 338949 458008 ~ 460345 (+)
G195003 NA other downstream 360229 1161157 ~ 1161690 (+)
CI01000046_01540075_01668012 HS3ST4 other downstream 738566 1539494 ~ 1668012 (+)
CI01000046_01865451_01881353 NA other downstream 1071867 1865451 ~ 1881369 (+)
CI01000046_02451052_02454565 MAFK other downstream 1638989 2442395 ~ 2457280 (+)
G196936 NA other downstream 2386067 3186995 ~ 3194271 (+)

Expression


Co-expression Network