G194991


Basic Information

Item Value
gene id G194991
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 1090216 ~ 1090428 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU221463
TAACTCTTGACAAATATCTGTTAGTCAATGTGTATGCCTGTCAATATGGCTATTTTCCATGTTGGACGAATGGAAAACCATTATGAAACATGTAGGGTCATTGTTTACTCACCCATAAATATATATATATATAAAAAAAACAAAAAAAAACAGCAAATATGAAATATCTTTTCTGCCTTTACTACACTCCTGGGCAAAAAAAAAAACAAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU221463 True 213 lncRNA 0.30 1 1090216 1090428

Neighbor

gene id symbol gene type direction distance location
CI01000046_01067894_01070331 H3F3AP4, H3F3C, H3F3B, H3F3A, GM6421 coding upstream 19439 1066936 ~ 1070777 (+)
CI01000046_01026787_01028640 IGFALS coding upstream 61347 1026502 ~ 1028869 (+)
CI01000046_00893353_00931079 SHISA9B coding upstream 157773 893299 ~ 932443 (+)
CI01000046_00784993_00786387 NA coding upstream 303136 784645 ~ 787080 (+)
CI01000046_00781088_00781355 CP033, SNRNP25 coding upstream 308861 781088 ~ 781355 (+)
CI01000046_01149090_01159654 NA coding downstream 58508 1148936 ~ 1160102 (+)
CI01000046_01246234_01251650 NA coding downstream 155304 1245732 ~ 1251689 (+)
CI01000046_01255895_01262232 NA coding downstream 165467 1255895 ~ 1262547 (+)
CI01000046_01275798_01283718 PDPK1A coding downstream 185370 1275798 ~ 1284100 (+)
CI01000046_01289846_01293954 KCTD5A, KCTD5 coding downstream 199140 1289568 ~ 1294336 (+)
G194988 NA non-coding upstream 3420 1086531 ~ 1086796 (+)
G194987 NA non-coding upstream 3817 1086167 ~ 1086399 (+)
G194979 NA non-coding upstream 16552 1073385 ~ 1073664 (+)
G194977 NA non-coding upstream 17630 1072325 ~ 1072586 (+)
G194968 NA non-coding upstream 53413 1036553 ~ 1036803 (+)
G195015 NA non-coding downstream 56579 1147007 ~ 1147555 (+)
G195018 NA non-coding downstream 66699 1157127 ~ 1157332 (+)
G195038 NA non-coding downstream 116017 1206445 ~ 1208328 (+)
G195047 NA non-coding downstream 137057 1227485 ~ 1227867 (+)
G195048 NA non-coding downstream 138288 1228716 ~ 1228919 (+)
G194721 NA other upstream 629871 458008 ~ 460345 (+)
G195003 NA other downstream 70729 1161157 ~ 1161690 (+)
CI01000046_01540075_01668012 HS3ST4 other downstream 449066 1539494 ~ 1668012 (+)
CI01000046_01865451_01881353 NA other downstream 782367 1865451 ~ 1881369 (+)
CI01000046_02451052_02454565 MAFK other downstream 1349489 2442395 ~ 2457280 (+)
G196936 NA other downstream 2096567 3186995 ~ 3194271 (+)

Expression


Co-expression Network