Gene
RNA
| Item | Value |
|---|---|
| gene id | G195003 |
| gene name | NA |
| gene type | unknown |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000046 |
| NCBI id | null |
| chromosome length | 7063170 |
| location | 1161157 ~ 1161690 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU221488 | True | 534 | TUCP | 0.44 | 1 | 1161157 | 1161690 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000046_01149090_01159654 | NA | coding | upstream | 1055 | 1148936 ~ 1160102 (+) |
| CI01000046_01067894_01070331 | H3F3AP4, H3F3C, H3F3B, H3F3A, GM6421 | coding | upstream | 90380 | 1066936 ~ 1070777 (+) |
| CI01000046_01026787_01028640 | IGFALS | coding | upstream | 132288 | 1026502 ~ 1028869 (+) |
| CI01000046_00893353_00931079 | SHISA9B | coding | upstream | 228714 | 893299 ~ 932443 (+) |
| CI01000046_00784993_00786387 | NA | coding | upstream | 374077 | 784645 ~ 787080 (+) |
| CI01000046_01246234_01251650 | NA | coding | downstream | 84042 | 1245732 ~ 1251689 (+) |
| CI01000046_01255895_01262232 | NA | coding | downstream | 94205 | 1255895 ~ 1262547 (+) |
| CI01000046_01275798_01283718 | PDPK1A | coding | downstream | 114108 | 1275798 ~ 1284100 (+) |
| CI01000046_01289846_01293954 | KCTD5A, KCTD5 | coding | downstream | 127878 | 1289568 ~ 1294336 (+) |
| CI01000046_01318513_01343464 | USP31 | coding | downstream | 154980 | 1316670 ~ 1344195 (+) |
| G195018 | NA | non-coding | upstream | 3825 | 1157127 ~ 1157332 (+) |
| G195015 | NA | non-coding | upstream | 13602 | 1147007 ~ 1147555 (+) |
| G194991 | NA | non-coding | upstream | 70729 | 1090216 ~ 1090428 (+) |
| G194988 | NA | non-coding | upstream | 74361 | 1086531 ~ 1086796 (+) |
| G194987 | NA | non-coding | upstream | 74758 | 1086167 ~ 1086399 (+) |
| G195038 | NA | non-coding | downstream | 44755 | 1206445 ~ 1208328 (+) |
| G195047 | NA | non-coding | downstream | 65795 | 1227485 ~ 1227867 (+) |
| G195048 | NA | non-coding | downstream | 67026 | 1228716 ~ 1228919 (+) |
| G195049 | NA | non-coding | downstream | 67538 | 1229228 ~ 1229433 (+) |
| G195535 | NA | non-coding | downstream | 223062 | 1384752 ~ 1384970 (+) |
| G194721 | NA | other | upstream | 700812 | 458008 ~ 460345 (+) |
| CI01000046_01540075_01668012 | HS3ST4 | other | downstream | 377804 | 1539494 ~ 1668012 (+) |
| CI01000046_01865451_01881353 | NA | other | downstream | 711105 | 1865451 ~ 1881369 (+) |
| CI01000046_02451052_02454565 | MAFK | other | downstream | 1278227 | 2442395 ~ 2457280 (+) |
| G196936 | NA | other | downstream | 2025305 | 3186995 ~ 3194271 (+) |
| CI01000046_03943890_03945302 | ATP5J2 | other | downstream | 2782138 | 3943794 ~ 3945500 (+) |
