Gene
RNA
| Item | Value |
|---|---|
| gene id | G195047 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000046 |
| NCBI id | null |
| chromosome length | 7063170 |
| location | 1227485 ~ 1227867 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU221539 | True | 383 | lncRNA | 0.31 | 1 | 1227485 | 1227867 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000046_01149090_01159654 | NA | coding | upstream | 67383 | 1148936 ~ 1160102 (+) |
| CI01000046_01067894_01070331 | H3F3AP4, H3F3C, H3F3B, H3F3A, GM6421 | coding | upstream | 156708 | 1066936 ~ 1070777 (+) |
| CI01000046_01026787_01028640 | IGFALS | coding | upstream | 198616 | 1026502 ~ 1028869 (+) |
| CI01000046_00893353_00931079 | SHISA9B | coding | upstream | 295042 | 893299 ~ 932443 (+) |
| CI01000046_00784993_00786387 | NA | coding | upstream | 440405 | 784645 ~ 787080 (+) |
| CI01000046_01246234_01251650 | NA | coding | downstream | 17865 | 1245732 ~ 1251689 (+) |
| CI01000046_01255895_01262232 | NA | coding | downstream | 28028 | 1255895 ~ 1262547 (+) |
| CI01000046_01275798_01283718 | PDPK1A | coding | downstream | 47931 | 1275798 ~ 1284100 (+) |
| CI01000046_01289846_01293954 | KCTD5A, KCTD5 | coding | downstream | 61701 | 1289568 ~ 1294336 (+) |
| CI01000046_01318513_01343464 | USP31 | coding | downstream | 88803 | 1316670 ~ 1344195 (+) |
| G195038 | NA | non-coding | upstream | 19157 | 1206445 ~ 1208328 (+) |
| G195018 | NA | non-coding | upstream | 70153 | 1157127 ~ 1157332 (+) |
| G195015 | NA | non-coding | upstream | 79930 | 1147007 ~ 1147555 (+) |
| G194991 | NA | non-coding | upstream | 137057 | 1090216 ~ 1090428 (+) |
| G194988 | NA | non-coding | upstream | 140689 | 1086531 ~ 1086796 (+) |
| G195048 | NA | non-coding | downstream | 849 | 1228716 ~ 1228919 (+) |
| G195049 | NA | non-coding | downstream | 1361 | 1229228 ~ 1229433 (+) |
| G195535 | NA | non-coding | downstream | 156885 | 1384752 ~ 1384970 (+) |
| G195564 | NA | non-coding | downstream | 168896 | 1396763 ~ 1397086 (+) |
| G195909 | NA | non-coding | downstream | 515933 | 1743800 ~ 1744017 (+) |
| G195003 | NA | other | upstream | 65795 | 1161157 ~ 1161690 (+) |
| G194721 | NA | other | upstream | 767140 | 458008 ~ 460345 (+) |
| CI01000046_01540075_01668012 | HS3ST4 | other | downstream | 311627 | 1539494 ~ 1668012 (+) |
| CI01000046_01865451_01881353 | NA | other | downstream | 644928 | 1865451 ~ 1881369 (+) |
| CI01000046_02451052_02454565 | MAFK | other | downstream | 1212050 | 2442395 ~ 2457280 (+) |
| G196936 | NA | other | downstream | 1959128 | 3186995 ~ 3194271 (+) |
| CI01000046_03943890_03945302 | ATP5J2 | other | downstream | 2715961 | 3943794 ~ 3945500 (+) |
