G195564


Basic Information

Item Value
gene id G195564
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 1396763 ~ 1397086 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU222125
GTCAAACTATTTCTAATAAATCTGAAATTCGCTACATTAAATTTCGCTGTATTTACCACTTTCTTCGCATGTCTTTTAAAAGAAAGTTAAGAATCCAGTAATAATCCTAAATATTTAAATTCATGTACTACCTCAAGCTTTTGTTCCTGGACAAATACATCTGCTTTCACATCACAATCTGGCATTTTAGTAAAAAACATACAAACAGTTTTTCTGACATTAAGATGCAAATGTGAATTGATAATCCATTGTGCAACTTGATTCACACTTGCATTGTTGACACACATGCTCAAGTTATTTTTATGTCCACAATTAAAAATTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU222125 True 324 lncRNA 0.31 1 1396763 1397086

Neighbor

gene id symbol gene type direction distance location
CI01000046_01318513_01343464 USP31 coding upstream 52568 1316670 ~ 1344195 (+)
CI01000046_01289846_01293954 KCTD5A, KCTD5 coding upstream 102427 1289568 ~ 1294336 (+)
CI01000046_01275798_01283718 PDPK1A coding upstream 112663 1275798 ~ 1284100 (+)
CI01000046_01255895_01262232 NA coding upstream 134216 1255895 ~ 1262547 (+)
CI01000046_01246234_01251650 NA coding upstream 145074 1245732 ~ 1251689 (+)
CI01000046_01540075_01668012 HS3ST4 coding downstream 142989 1539494 ~ 1668012 (+)
CI01000046_01865451_01881353 NA coding downstream 468365 1865451 ~ 1881369 (+)
CI01000046_01903950_01922429 KDM8 coding downstream 505004 1902090 ~ 1922439 (+)
CI01000046_01933932_01935589 NA coding downstream 535804 1932890 ~ 1937822 (+)
CI01000046_01963803_01965901 NA coding downstream 566469 1963555 ~ 1968371 (+)
G195535 NA non-coding upstream 11793 1384752 ~ 1384970 (+)
G195049 NA non-coding upstream 167330 1229228 ~ 1229433 (+)
G195048 NA non-coding upstream 167844 1228716 ~ 1228919 (+)
G195047 NA non-coding upstream 168896 1227485 ~ 1227867 (+)
G195038 NA non-coding upstream 188435 1206445 ~ 1208328 (+)
G195909 NA non-coding downstream 346714 1743800 ~ 1744017 (+)
G196035 NA non-coding downstream 469418 1866504 ~ 1866807 (+)
G196038 NA non-coding downstream 473612 1870698 ~ 1870980 (+)
G196050 NA non-coding downstream 564133 1961219 ~ 1961759 (+)
G195003 NA other upstream 235073 1161157 ~ 1161690 (+)
G194721 NA other upstream 936418 458008 ~ 460345 (+)
CI01000046_02451052_02454565 MAFK other downstream 1042831 2442395 ~ 2457280 (+)
G196936 NA other downstream 1789909 3186995 ~ 3194271 (+)
CI01000046_03943890_03945302 ATP5J2 other downstream 2546742 3943794 ~ 3945500 (+)

Expression


Co-expression Network