G196086


Basic Information

Item Value
gene id G196086
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 2087279 ~ 2087514 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU222701
CAGTTGATGCAGTGAACACAGTTCAGCGCTTCCGTGTTTATGTCCGAACGCCGACTCATTATTGGCCGGCTCCTGCGTCAGTATCACACGCATGCGTCGTGCTGCTCACGTGAACAGCGTCTGCCAATACTGAGTCGGCGTTCTGACGCAGAACCTGGATGCGCTGCAACGAAAATACCGTAGGAGAATGACAGGGGAGAGACAAATTTGTTGAATAAAGCAATTATTTTTGTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU222701 True 236 lncRNA 0.50 1 2087279 2087514

Neighbor

gene id symbol gene type direction distance location
CI01000046_02066859_02072868 NA coding upstream 14265 2066859 ~ 2073014 (+)
CI01000046_02037519_02037782 SNN, CP075, SNN.S, SNN.L coding upstream 48224 2037421 ~ 2039716 (+)
CI01000046_02027256_02031337 RMI2 coding upstream 55828 2027154 ~ 2031451 (+)
CI01000046_02006028_02024639 NA coding upstream 62339 2006028 ~ 2024940 (+)
CI01000046_01988070_01995034 UBFD1 coding upstream 91949 1986320 ~ 1995330 (+)
CI01000046_02123765_02158243 AXIN1 coding downstream 36251 2123765 ~ 2158243 (+)
CI01000046_02264732_02268319 UNCX coding downstream 177058 2264572 ~ 2268638 (+)
CI01000046_02335530_02348525 NA coding downstream 246460 2333974 ~ 2348945 (+)
CI01000046_02356713_02359204 NA coding downstream 269140 2356654 ~ 2360009 (+)
CI01000046_02365658_02365816 NA coding downstream 278144 2365658 ~ 2366186 (+)
G196085 NA non-coding upstream 148 2086809 ~ 2087131 (+)
G196080 NA non-coding upstream 3633 2082685 ~ 2083646 (+)
G196076 NA non-coding upstream 8799 2078122 ~ 2078480 (+)
G195981 NA non-coding upstream 30263 2056070 ~ 2057016 (+)
G196087 NA non-coding downstream 1210 2088724 ~ 2089219 (+)
G195994 NA non-coding downstream 18838 2106352 ~ 2110763 (+)
G196102 NA non-coding downstream 75769 2163283 ~ 2163494 (+)
G196106 NA non-coding downstream 78755 2166269 ~ 2166588 (+)
G196128 NA non-coding downstream 94984 2182498 ~ 2182699 (+)
CI01000046_01865451_01881353 NA other upstream 128131 1865451 ~ 1881369 (+)
CI01000046_01540075_01668012 HS3ST4 other upstream 523942 1539494 ~ 1668012 (+)
G195003 NA other upstream 925589 1161157 ~ 1161690 (+)
G194721 NA other upstream 1626934 458008 ~ 460345 (+)
CI01000046_02451052_02454565 MAFK other downstream 352403 2442395 ~ 2457280 (+)
G196936 NA other downstream 1099481 3186995 ~ 3194271 (+)
CI01000046_03943890_03945302 ATP5J2 other downstream 1856314 3943794 ~ 3945500 (+)
G197055 NA other downstream 2061909 4149423 ~ 4149780 (+)
G197121 NA other downstream 2283497 4371011 ~ 4371430 (+)

Expression


Co-expression Network