G196106


Basic Information

Item Value
gene id G196106
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 2166269 ~ 2166588 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU222722
GCTAAAGCATTGAAAATCCCCATTTCCATCATCAGGGCAATAATTAAGAAGTTCCAATCAACTAAAGATGTTACAAATCTGCCTGGAAGAGGACGTGTGTCTATATCGTCCTAATGTGCGGTGATGAGGAGAGTTTGAGTGGACAAAGACTCTCCAAGGATCACAGCTGCAGAATTGCAGAAATTAGTTGAGTCTTGAGTCTCAGAAAGCCTAAAAAAAATGATCAAACAGCACCTACATCACCTCAAGTTGTTCGGGAGGGTTTCAAGAAAAATCCTCTGCTCTCATCCAGAAACAATCTCGAGCATATTCAGTTGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU222722 True 320 lncRNA 0.41 1 2166269 2166588

Neighbor

gene id symbol gene type direction distance location
CI01000046_02123765_02158243 AXIN1 coding upstream 8026 2123765 ~ 2158243 (+)
CI01000046_02066859_02072868 NA coding upstream 93255 2066859 ~ 2073014 (+)
CI01000046_02037519_02037782 SNN, CP075, SNN.S, SNN.L coding upstream 127214 2037421 ~ 2039716 (+)
CI01000046_02027256_02031337 RMI2 coding upstream 134818 2027154 ~ 2031451 (+)
CI01000046_02006028_02024639 NA coding upstream 141329 2006028 ~ 2024940 (+)
CI01000046_02264732_02268319 UNCX coding downstream 97984 2264572 ~ 2268638 (+)
CI01000046_02335530_02348525 NA coding downstream 167386 2333974 ~ 2348945 (+)
CI01000046_02356713_02359204 NA coding downstream 190066 2356654 ~ 2360009 (+)
CI01000046_02365658_02365816 NA coding downstream 199070 2365658 ~ 2366186 (+)
CI01000046_02451052_02454565 MAFK coding downstream 284464 2442395 ~ 2457280 (+)
G196102 NA non-coding upstream 2775 2163283 ~ 2163494 (+)
G195994 NA non-coding upstream 55506 2106352 ~ 2110763 (+)
G196087 NA non-coding upstream 77050 2088724 ~ 2089219 (+)
G196086 NA non-coding upstream 78755 2087279 ~ 2087514 (+)
G196085 NA non-coding upstream 79138 2086809 ~ 2087131 (+)
G196128 NA non-coding downstream 15910 2182498 ~ 2182699 (+)
G196131 NA non-coding downstream 29055 2195643 ~ 2195853 (+)
G196142 NA non-coding downstream 53607 2220195 ~ 2223088 (+)
G196141 NA non-coding downstream 57918 2224506 ~ 2226140 (+)
G196147 NA non-coding downstream 88807 2255395 ~ 2255629 (+)
CI01000046_01865451_01881353 NA other upstream 207121 1865451 ~ 1881369 (+)
CI01000046_01540075_01668012 HS3ST4 other upstream 602932 1539494 ~ 1668012 (+)
G195003 NA other upstream 1004579 1161157 ~ 1161690 (+)
G194721 NA other upstream 1705924 458008 ~ 460345 (+)
G196936 NA other downstream 1020407 3186995 ~ 3194271 (+)
CI01000046_03943890_03945302 ATP5J2 other downstream 1777240 3943794 ~ 3945500 (+)
G197055 NA other downstream 1982835 4149423 ~ 4149780 (+)
G197121 NA other downstream 2204423 4371011 ~ 4371430 (+)

Expression


Co-expression Network