G196154


Basic Information

Item Value
gene id G196154
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 2262248 ~ 2262482 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU222783
CCACGTCTTTTTCTTTAATTGGAGCTGCATCTCGTCGTATCAAATCATCCACAACAATTAATTTAGATTTAATTCTATAATTATCATCAAATCGAATAATGTGCAACTTAATTTAGATAGTTAAAAATTAACGCGCGTGAAGTTAATTGAGTAATTAAACTCCTCAGCTGTTGCGTATTAATTTGCTAGCCTAATTAAAAATGAATTTGATTTTATGTAATGTTAGTGATGCGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU222783 True 235 lncRNA 0.30 1 2262248 2262482

Neighbor

gene id symbol gene type direction distance location
CI01000046_02123765_02158243 AXIN1 coding upstream 104005 2123765 ~ 2158243 (+)
CI01000046_02066859_02072868 NA coding upstream 189234 2066859 ~ 2073014 (+)
CI01000046_02037519_02037782 SNN, CP075, SNN.S, SNN.L coding upstream 223193 2037421 ~ 2039716 (+)
CI01000046_02027256_02031337 RMI2 coding upstream 230797 2027154 ~ 2031451 (+)
CI01000046_02006028_02024639 NA coding upstream 237308 2006028 ~ 2024940 (+)
CI01000046_02264732_02268319 UNCX coding downstream 2090 2264572 ~ 2268638 (+)
CI01000046_02335530_02348525 NA coding downstream 71492 2333974 ~ 2348945 (+)
CI01000046_02356713_02359204 NA coding downstream 94172 2356654 ~ 2360009 (+)
CI01000046_02365658_02365816 NA coding downstream 103176 2365658 ~ 2366186 (+)
CI01000046_02451052_02454565 MAFK coding downstream 188570 2442395 ~ 2457280 (+)
G196147 NA non-coding upstream 6619 2255395 ~ 2255629 (+)
G196141 NA non-coding upstream 36108 2224506 ~ 2226140 (+)
G196142 NA non-coding upstream 39160 2220195 ~ 2223088 (+)
G196131 NA non-coding upstream 66395 2195643 ~ 2195853 (+)
G196128 NA non-coding upstream 79549 2182498 ~ 2182699 (+)
G196155 NA non-coding downstream 659 2263141 ~ 2263375 (+)
G196156 NA non-coding downstream 1349 2263831 ~ 2264062 (+)
G196164 NA non-coding downstream 21056 2283538 ~ 2283766 (+)
G196176 NA non-coding downstream 38944 2301426 ~ 2301796 (+)
G196177 NA non-coding downstream 39373 2301855 ~ 2302078 (+)
CI01000046_01865451_01881353 NA other upstream 303100 1865451 ~ 1881369 (+)
CI01000046_01540075_01668012 HS3ST4 other upstream 698911 1539494 ~ 1668012 (+)
G195003 NA other upstream 1100558 1161157 ~ 1161690 (+)
G194721 NA other upstream 1801903 458008 ~ 460345 (+)
G196936 NA other downstream 924513 3186995 ~ 3194271 (+)
CI01000046_03943890_03945302 ATP5J2 other downstream 1681346 3943794 ~ 3945500 (+)
G197055 NA other downstream 1886941 4149423 ~ 4149780 (+)
G197121 NA other downstream 2108529 4371011 ~ 4371430 (+)

Expression


Co-expression Network