G196177


Basic Information

Item Value
gene id G196177
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 2301855 ~ 2302078 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU222806
GGTGATGTAAGGCTTGGATGCAGCTGCTCGGCCATGGAAACCCATTCCATGAAGCTCTCTACACACTGTTCTTGAGCTAATCTGAAGGCCACACAAAGTTTGGAGGTCTGTAGCTATTGACTCTGCAGAAAGTTGGCGACTTCTGCGCACTGTGTGCCTCAGCATGCGCTGATCCCGCTCTGTGATTTTATGTGGACTACCACTTCGTGGCTGAGTTGCTGTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU222806 True 224 lncRNA 0.51 1 2301855 2302078

Neighbor

gene id symbol gene type direction distance location
CI01000046_02264732_02268319 UNCX coding upstream 33217 2264572 ~ 2268638 (+)
CI01000046_02123765_02158243 AXIN1 coding upstream 143612 2123765 ~ 2158243 (+)
CI01000046_02066859_02072868 NA coding upstream 228841 2066859 ~ 2073014 (+)
CI01000046_02037519_02037782 SNN, CP075, SNN.S, SNN.L coding upstream 262800 2037421 ~ 2039716 (+)
CI01000046_02027256_02031337 RMI2 coding upstream 270404 2027154 ~ 2031451 (+)
CI01000046_02335530_02348525 NA coding downstream 31896 2333974 ~ 2348945 (+)
CI01000046_02356713_02359204 NA coding downstream 54576 2356654 ~ 2360009 (+)
CI01000046_02365658_02365816 NA coding downstream 63580 2365658 ~ 2366186 (+)
CI01000046_02451052_02454565 MAFK coding downstream 148974 2442395 ~ 2457280 (+)
CI01000046_02616123_02661535 NA coding downstream 313969 2616047 ~ 2661964 (+)
G196176 NA non-coding upstream 59 2301426 ~ 2301796 (+)
G196164 NA non-coding upstream 18089 2283538 ~ 2283766 (+)
G196156 NA non-coding upstream 37793 2263831 ~ 2264062 (+)
G196155 NA non-coding upstream 38480 2263141 ~ 2263375 (+)
G196154 NA non-coding upstream 39373 2262248 ~ 2262482 (+)
G196119 NA non-coding downstream 7742 2309820 ~ 2649187 (+)
G196209 NA non-coding downstream 83672 2385750 ~ 2386244 (+)
G196107 NA non-coding downstream 135772 2437850 ~ 2481044 (+)
G196122 NA non-coding downstream 335920 2637998 ~ 2689802 (+)
CI01000046_01865451_01881353 NA other upstream 342707 1865451 ~ 1881369 (+)
CI01000046_01540075_01668012 HS3ST4 other upstream 738518 1539494 ~ 1668012 (+)
G195003 NA other upstream 1140165 1161157 ~ 1161690 (+)
G194721 NA other upstream 1841510 458008 ~ 460345 (+)
G196936 NA other downstream 884917 3186995 ~ 3194271 (+)
CI01000046_03943890_03945302 ATP5J2 other downstream 1641750 3943794 ~ 3945500 (+)
G197055 NA other downstream 1847345 4149423 ~ 4149780 (+)
G197121 NA other downstream 2068933 4371011 ~ 4371430 (+)

Expression


Co-expression Network