G196687


Basic Information

Item Value
gene id G196687
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 2764868 ~ 2765242 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU223339
GAAAAGACCACAAGCCGGGACTTGAACTCATGTCGCCCGAAGCATTGTTGCGCTATATGTCAGAGTACTGACTACAAGGCTATGGCTTAGACAATAGGGATTTTATAAAAGCCTTTGTTAAAGAGTTATAAGCCATGAACCAAATACAAACCAGCTACAATCGTGAACCACAACATTAAAGTTTGATTTTAATAAAAAAAAAGTATTGGAAATCAGAAAAAACAAAAAACAAAAAAAAAAACAAAGGTACAAGCCTGTAATTAACAGCTTAAAGGAGAGAAATAACTACAATCTCATGAAGCACTGCCCATGATAGGCCCAAGCCGTTTTAACGCACCTAAACACTACTCAGGCCGATTTTGGGCCCAATTCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223339 True 375 lncRNA 0.38 1 2764868 2765242

Neighbor

gene id symbol gene type direction distance location
CI01000046_02674254_02676647 ELFN1, ELFN1A coding upstream 88067 2674060 ~ 2676801 (+)
CI01000046_02616123_02661535 NA coding upstream 102904 2616047 ~ 2661964 (+)
CI01000046_02451052_02454565 MAFK coding upstream 310197 2442395 ~ 2457280 (+)
CI01000046_02365658_02365816 NA coding upstream 398682 2365658 ~ 2366186 (+)
CI01000046_02356713_02359204 NA coding upstream 404859 2356654 ~ 2360009 (+)
CI01000046_02794245_02796188 NA coding downstream 28637 2793879 ~ 2797088 (+)
CI01000046_02868880_02871348 NUDT1, 8ODP coding downstream 103638 2868880 ~ 2871611 (+)
CI01000046_02911888_02930362 NA coding downstream 145903 2911145 ~ 2930993 (+)
CI01000046_02933552_02949246 NA coding downstream 168245 2933487 ~ 2949318 (+)
CI01000046_02981176_03006650 NA coding downstream 215585 2980827 ~ 3006675 (+)
G196123 NA non-coding upstream 14902 2649288 ~ 2749966 (+)
G196122 NA non-coding upstream 75066 2637998 ~ 2689802 (+)
G196119 NA non-coding upstream 115681 2309820 ~ 2649187 (+)
G196107 NA non-coding upstream 283824 2437850 ~ 2481044 (+)
G196691 NA non-coding downstream 10129 2775371 ~ 2775660 (+)
G196703 NA non-coding downstream 26719 2791961 ~ 2792212 (+)
G196698 NA non-coding downstream 29128 2794370 ~ 2873461 (+)
G196744 NA non-coding downstream 175906 2941148 ~ 2941489 (+)
G196749 NA non-coding downstream 200946 2966188 ~ 2966536 (+)
CI01000046_01865451_01881353 NA other upstream 805720 1865451 ~ 1881369 (+)
CI01000046_01540075_01668012 HS3ST4 other upstream 1201531 1539494 ~ 1668012 (+)
G195003 NA other upstream 1603178 1161157 ~ 1161690 (+)
G194721 NA other upstream 2304523 458008 ~ 460345 (+)
G196936 NA other downstream 421753 3186995 ~ 3194271 (+)
CI01000046_03943890_03945302 ATP5J2 other downstream 1178586 3943794 ~ 3945500 (+)
G197055 NA other downstream 1384181 4149423 ~ 4149780 (+)
G197121 NA other downstream 1605769 4371011 ~ 4371430 (+)
G196869 NA other downstream 1650288 4415530 ~ 4421687 (+)

Expression


Co-expression Network