G196744


Basic Information

Item Value
gene id G196744
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 2941148 ~ 2941489 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU223403
TTCTCAGTGCGCGCGATCTTCAAGTTTTGCGCAGCTACTGTTTGTATGAGTGTTCGTGCCACAATGCAGCTGCGCGAGCACGGTAGCTCGATATAATACACATCCGATTGTCTAAAATCGCTTGAATGTCCAAACTGACAAACCTTAAAACACATACAACTGACAAGTTTAGTGAAGACGCAAGAGTCACGTGGCTACACACGCGGTAGTATGTTTTTAAGGGGGAAGTATTAACAGGATTAAAAAACCGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223403 True 252 lncRNA 0.44 2 2941148 2941489

Neighbor

gene id symbol gene type direction distance location
CI01000046_02911888_02930362 NA coding upstream 10155 2911145 ~ 2930993 (+)
CI01000046_02868880_02871348 NUDT1, 8ODP coding upstream 69537 2868880 ~ 2871611 (+)
CI01000046_02794245_02796188 NA coding upstream 144060 2793879 ~ 2797088 (+)
CI01000046_02674254_02676647 ELFN1, ELFN1A coding upstream 264347 2674060 ~ 2676801 (+)
CI01000046_02616123_02661535 NA coding upstream 279184 2616047 ~ 2661964 (+)
CI01000046_02981176_03006650 NA coding downstream 39338 2980827 ~ 3006675 (+)
CI01000046_03041320_03042564 GRIFIN coding downstream 99831 3041320 ~ 3042750 (+)
CI01000046_03046400_03047689 NA coding downstream 104290 3045779 ~ 3048432 (+)
CI01000046_03138487_03139142 NA coding downstream 196998 3138487 ~ 3140879 (+)
CI01000046_03205894_03253907 NA coding downstream 264103 3205592 ~ 3254330 (+)
G196698 NA non-coding upstream 67687 2794370 ~ 2873461 (+)
G196703 NA non-coding upstream 148936 2791961 ~ 2792212 (+)
G196691 NA non-coding upstream 165488 2775371 ~ 2775660 (+)
G196687 NA non-coding upstream 175906 2764868 ~ 2765242 (+)
G196123 NA non-coding upstream 191182 2649288 ~ 2749966 (+)
G196749 NA non-coding downstream 24699 2966188 ~ 2966536 (+)
G196754 NA non-coding downstream 40089 2981578 ~ 2981812 (+)
G196757 NA non-coding downstream 48675 2990164 ~ 2990436 (+)
G196773 NA non-coding downstream 74976 3016465 ~ 3016713 (+)
G196780 NA non-coding downstream 81670 3023159 ~ 3023393 (+)
CI01000046_02451052_02454565 MAFK other upstream 483868 2442395 ~ 2457280 (+)
CI01000046_01865451_01881353 NA other upstream 982000 1865451 ~ 1881369 (+)
CI01000046_01540075_01668012 HS3ST4 other upstream 1377811 1539494 ~ 1668012 (+)
G195003 NA other upstream 1779458 1161157 ~ 1161690 (+)
G194721 NA other upstream 2480803 458008 ~ 460345 (+)
G196936 NA other downstream 245506 3186995 ~ 3194271 (+)
CI01000046_03943890_03945302 ATP5J2 other downstream 1002339 3943794 ~ 3945500 (+)
G197055 NA other downstream 1207934 4149423 ~ 4149780 (+)
G197121 NA other downstream 1429522 4371011 ~ 4371430 (+)
G196869 NA other downstream 1474041 4415530 ~ 4421687 (+)

Expression


Co-expression Network