G196773


Basic Information

Item Value
gene id G196773
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 3016465 ~ 3016713 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU223432
TAAACTTGGTTGGCTGGAAACAAGCTTGGTTTGAAGATGAAAAATGTACCAAGCACAATGTTCTCTCACCATTCCTGATTTCTAACACTCACTCACAGCATTTGCCGTGGTCTTGCGGCTATCAGAGCAGAAACGAAAGCTGATGCTCTCCGTGTTTTTCCATCGTCTCCGGGCGCTTTCATATGTAAATTGCGTAAGCTTATTTTGTCCATTAGATCGAAAGATCTAAAAATAACCCATACATTTACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223432 True 249 lncRNA 0.41 1 3016465 3016713

Neighbor

gene id symbol gene type direction distance location
CI01000046_02981176_03006650 NA coding upstream 9790 2980827 ~ 3006675 (+)
CI01000046_02933552_02949246 NA coding upstream 67147 2933487 ~ 2949318 (+)
CI01000046_02911888_02930362 NA coding upstream 85472 2911145 ~ 2930993 (+)
CI01000046_02868880_02871348 NUDT1, 8ODP coding upstream 144854 2868880 ~ 2871611 (+)
CI01000046_02794245_02796188 NA coding upstream 219377 2793879 ~ 2797088 (+)
CI01000046_03041320_03042564 GRIFIN coding downstream 24607 3041320 ~ 3042750 (+)
CI01000046_03046400_03047689 NA coding downstream 29066 3045779 ~ 3048432 (+)
CI01000046_03138487_03139142 NA coding downstream 121774 3138487 ~ 3140879 (+)
CI01000046_03205894_03253907 NA coding downstream 188879 3205592 ~ 3254330 (+)
CI01000046_03347042_03438271 SDK1, SDK1A coding downstream 330329 3347042 ~ 3438271 (+)
G196757 NA non-coding upstream 26029 2990164 ~ 2990436 (+)
G196754 NA non-coding upstream 34653 2981578 ~ 2981812 (+)
G196749 NA non-coding upstream 49929 2966188 ~ 2966536 (+)
G196744 NA non-coding upstream 74976 2941148 ~ 2941489 (+)
G196698 NA non-coding upstream 143004 2794370 ~ 2873461 (+)
G196780 NA non-coding downstream 6446 3023159 ~ 3023393 (+)
G196809 NA non-coding downstream 26478 3043191 ~ 3043482 (+)
G196784 NA non-coding downstream 66220 3082933 ~ 3084120 (+)
CI01000046_02451052_02454565 MAFK other upstream 559185 2442395 ~ 2457280 (+)
CI01000046_01865451_01881353 NA other upstream 1057317 1865451 ~ 1881369 (+)
CI01000046_01540075_01668012 HS3ST4 other upstream 1453128 1539494 ~ 1668012 (+)
G195003 NA other upstream 1854775 1161157 ~ 1161690 (+)
G194721 NA other upstream 2556120 458008 ~ 460345 (+)
G196936 NA other downstream 170282 3186995 ~ 3194271 (+)
CI01000046_03943890_03945302 ATP5J2 other downstream 927115 3943794 ~ 3945500 (+)
G197055 NA other downstream 1132710 4149423 ~ 4149780 (+)
G197121 NA other downstream 1354298 4371011 ~ 4371430 (+)
G196869 NA other downstream 1398817 4415530 ~ 4421687 (+)

Expression


Co-expression Network