G196809


Basic Information

Item Value
gene id G196809
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 3043191 ~ 3043482 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU223469
TACAATTTAGAATAATTATATATTTTATAAAATATATTACATTTATTTCTGTGATGTCAAAGCTGAATTTTCAGCATCATTACTCCAGTCTTCAGTGTCACATGATCCTTCAGAAATCATTCTGATATGATGATTTGATGCTCAAAAAAACATGTATTATTATCAATGTTGAAAACAGTTTTGCTGCTTCATATTTATGTGTATTTTTTAGGATTCTTTCATGAATAGAAAGCCCAAAAGCATTTATTTGAAATAGAAATATTTTGTAACATTATAAATATCTTGACTGTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223469 True 292 lncRNA 0.26 1 3043191 3043482

Neighbor

gene id symbol gene type direction distance location
CI01000046_03041320_03042564 GRIFIN coding upstream 441 3041320 ~ 3042750 (+)
CI01000046_02981176_03006650 NA coding upstream 36516 2980827 ~ 3006675 (+)
CI01000046_02933552_02949246 NA coding upstream 93873 2933487 ~ 2949318 (+)
CI01000046_02911888_02930362 NA coding upstream 112198 2911145 ~ 2930993 (+)
CI01000046_02868880_02871348 NUDT1, 8ODP coding upstream 171580 2868880 ~ 2871611 (+)
CI01000046_03046400_03047689 NA coding downstream 2297 3045779 ~ 3048432 (+)
CI01000046_03138487_03139142 NA coding downstream 95005 3138487 ~ 3140879 (+)
CI01000046_03205894_03253907 NA coding downstream 162110 3205592 ~ 3254330 (+)
CI01000046_03347042_03438271 SDK1, SDK1A coding downstream 303560 3347042 ~ 3438271 (+)
CI01000046_03443490_03508344 SDK1, SDK1A coding downstream 399795 3443277 ~ 3508481 (+)
G196780 NA non-coding upstream 19798 3023159 ~ 3023393 (+)
G196773 NA non-coding upstream 26478 3016465 ~ 3016713 (+)
G196757 NA non-coding upstream 52755 2990164 ~ 2990436 (+)
G196754 NA non-coding upstream 61379 2981578 ~ 2981812 (+)
G196749 NA non-coding upstream 76655 2966188 ~ 2966536 (+)
G196784 NA non-coding downstream 39451 3082933 ~ 3084120 (+)
G196975 NA non-coding downstream 519015 3562497 ~ 3563548 (+)
G196885 NA non-coding downstream 579230 3622712 ~ 3642563 (+)
CI01000046_02451052_02454565 MAFK other upstream 585911 2442395 ~ 2457280 (+)
CI01000046_01865451_01881353 NA other upstream 1084043 1865451 ~ 1881369 (+)
CI01000046_01540075_01668012 HS3ST4 other upstream 1479854 1539494 ~ 1668012 (+)
G195003 NA other upstream 1881501 1161157 ~ 1161690 (+)
G194721 NA other upstream 2582846 458008 ~ 460345 (+)
G196936 NA other downstream 143513 3186995 ~ 3194271 (+)
CI01000046_03943890_03945302 ATP5J2 other downstream 900346 3943794 ~ 3945500 (+)
G197055 NA other downstream 1105941 4149423 ~ 4149780 (+)
G197121 NA other downstream 1327529 4371011 ~ 4371430 (+)
G196869 NA other downstream 1372048 4415530 ~ 4421687 (+)

Expression


Co-expression Network