Gene
RNA
| Item | Value |
|---|---|
| gene id | G196975 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000046 |
| NCBI id | null |
| chromosome length | 7063170 |
| location | 3562497 ~ 3563548 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU223637 | True | 407 | lncRNA | 0.49 | 2 | 3562497 | 3563548 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000046_03556534_03559710 | CYP3C1, CYP3C2, CYP3C3, CYP3C4 | coding | upstream | 2660 | 3556206 ~ 3559837 (+) |
| CI01000046_03544999_03551574 | CYP3C4 | coding | upstream | 10600 | 3544999 ~ 3551897 (+) |
| CI01000046_03511698_03542614 | SDK1, SDK1A | coding | upstream | 19653 | 3511405 ~ 3542844 (+) |
| CI01000046_03443490_03508344 | SDK1, SDK1A | coding | upstream | 54016 | 3443277 ~ 3508481 (+) |
| CI01000046_03347042_03438271 | SDK1, SDK1A | coding | upstream | 124226 | 3347042 ~ 3438271 (+) |
| CI01000046_03572743_03591418 | FOXK1 | coding | downstream | 7195 | 3570743 ~ 3591453 (+) |
| CI01000046_03596032_03605678 | AP5Z1 | coding | downstream | 31920 | 3595468 ~ 3605846 (+) |
| CI01000046_03624314_03633087 | WIPI2 | coding | downstream | 60766 | 3624314 ~ 3633201 (+) |
| CI01000046_03680288_03699097 | SMURF1 | coding | downstream | 116740 | 3680288 ~ 3699097 (+) |
| CI01000046_03712603_03713730 | NA | coding | downstream | 148924 | 3712472 ~ 3714191 (+) |
| CI01000046_03205894_03253907 | NA | non-coding | upstream | 323161 | 3205592 ~ 3254330 (+) |
| CI01000046_03138487_03139142 | NA | non-coding | upstream | 421618 | 3138487 ~ 3140879 (+) |
| G196784 | NA | non-coding | upstream | 478377 | 3082933 ~ 3084120 (+) |
| G196809 | NA | non-coding | upstream | 519015 | 3043191 ~ 3043482 (+) |
| G196780 | NA | non-coding | upstream | 539104 | 3023159 ~ 3023393 (+) |
| G196885 | NA | non-coding | downstream | 59164 | 3622712 ~ 3642563 (+) |
| G196857 | NA | non-coding | downstream | 75361 | 3638909 ~ 3641270 (+) |
| G196846 | NA | non-coding | downstream | 80635 | 3644183 ~ 3644698 (+) |
| G196994 | NA | non-coding | downstream | 208294 | 3771842 ~ 3772078 (+) |
| G196887 | NA | non-coding | downstream | 327472 | 3891020 ~ 3891841 (+) |
| G196936 | NA | other | upstream | 368226 | 3186995 ~ 3194271 (+) |
| CI01000046_02451052_02454565 | MAFK | other | upstream | 1105217 | 2442395 ~ 2457280 (+) |
| CI01000046_01865451_01881353 | NA | other | upstream | 1603349 | 1865451 ~ 1881369 (+) |
| CI01000046_01540075_01668012 | HS3ST4 | other | upstream | 1999160 | 1539494 ~ 1668012 (+) |
| G195003 | NA | other | upstream | 2400807 | 1161157 ~ 1161690 (+) |
| CI01000046_03943890_03945302 | ATP5J2 | other | downstream | 380280 | 3943794 ~ 3945500 (+) |
| G197055 | NA | other | downstream | 585875 | 4149423 ~ 4149780 (+) |
| G197121 | NA | other | downstream | 807463 | 4371011 ~ 4371430 (+) |
| G196869 | NA | other | downstream | 851982 | 4415530 ~ 4421687 (+) |
| G197352 | NA | other | downstream | 1710834 | 5259318 ~ 5276453 (+) |
