XLOC_009399 (si:ch211-272b8.7)


Basic Information

Item Value
gene id XLOC_009399
gene name si:ch211-272b8.7
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 35130621 ~ 35134918 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018486
ATGCGTCCGCCAGTCCAGGTCTGTGAAGATCCTCAGCTgttgagtgttccgggcccctCCAATATTAAGAAAACGACGGATGCAGATTCGGTCAGTCCTGAGTCGCCTTCGTCTGTTCAAGACCCCTCTAAAATTGATGGGACTGATGaaaaacccaagaaaggaaggaaagggaAAAGAGTCTCTGCTTTCTTTAAGAGAGTATGGAAGGCTGCAAAGCTCCCTTTCCTGCATTTTACGCCACAGCCTGAGCTCGAGCCCGACCCAGACCTTGAGTCAGTATGTCTGCCAGGCCAGCTTTCTGAGGAGGCTTCTGGGCTCACTCGTGgaTTTGATCTGTCTCAGTTTGAAGTCGGAGACATGATTGGAGATGGAACTTTTGGCGAGGTGTATGTGGCATCTCACAAACGCAGTAAAAGTGTAAAGGTTGCCCTAAAGTGTATGGTGAAGAGTCAAGAGGACCGTTATCTGGACGTTGATGGTCATTCCACACCTGTGCTTGCAGAAGTGGCAATGATGCTTAGGTTGATGAATGCGCCGCGATGTCCAAACATCATCAGATTACACGACTGGGTTGAGCTTGAGAACAACTTTGTTCTCATTCTGGAGTACGCAGAGTCATGCCAGACCTTGCATCAGTACATCAGAGACACAGTGGACATTGAAGAAAACCAAGCACGGCGGTTAATGCGGCAGTTGATCCGAGCTGTAATGTTCTGCGCTGAGCGTGGAGTTTTCCATGGTGATATACACACGGCGAACATCCTGGTGACTCAACCCCGATTAGAGCTCAAATTGATCGACTTTGGTTGTGCTCAGCCAATAACCCACAAGCCTTTTAATAGAAGTGACTATCGAGGAGCTGGAAATTGCATGCCACCTGAGGCTTTAAGGTGTCGTGTATTCCATGCTAACCCCGCATACGTCTGGACACTTGGCATCACGCTGTATGAAATAATGCATGGACGATTGGCCTTTAATAACAGACAGTCAATCATGTTTGGCTCCATTCAGATACACCCCAGGTTATCCACAGCATGCGTGGACCTGATTTCCCAGTGTTTGATCCGTAATCCAGTGAAACGGCTACAGTTACATCAGGTTGAAGAGCACTGCTGGTTCAATCCAACGACCCCAAATCCTGTGAAGCAGTTAGGCAAGAGGAGaaaaaactAAAGAAGCGAGGAGGAGGAGAGCACCATTTCCAGacatttcacaagactgttaaagTTGATAATtactccctcatgtcattccaaacccctaaGACCTTACTTTTCTTCAGTGTCAGTTCATGACGTGTGTTGATGAGAGCTCTGtcctgcactgtatgtgtgtcgcactgctgaTGTTTACCTCGGATGTTCCCATGCTTTGTTTAAATCAGAGGAAGTCGAGCAGGCCTCTGGGTTAAACATCAGC

Function

symbol description
si:ch211-272b8.7 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097997

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018486 True 1422 mRNA 0.48 8 35130621 35134918

Neighbor

gene id symbol gene type direction distance location
XLOC_009398 bloc1s3 coding downstream 3989 35036368 ~ 35126632 (-)
XLOC_009397 arhgef28b coding downstream 99098 35004547 ~ 35031523 (-)
XLOC_009396 dhx16 coding downstream 195837 34899645 ~ 34934784 (-)
XLOC_009395 rnf183 coding downstream 237926 34886480 ~ 34892695 (-)
XLOC_009394 BX629344.1 coding downstream 244997 34881013 ~ 34885624 (-)
XLOC_009400 agfg1a coding upstream 21496 35156414 ~ 35212462 (-)
XLOC_009401 mrpl44 coding upstream 79628 35214546 ~ 35224481 (-)
XLOC_009402 mff coding upstream 91755 35226673 ~ 35252548 (-)
XLOC_009403 mecom coding upstream 237989 35372907 ~ 35410860 (-)
XLOC_009404 CR848683.2 coding upstream 279548 35414466 ~ 35661368 (-)
XLOC_009389 NA non-coding downstream 523215 34602522 ~ 34607406 (-)
XLOC_009383 FP017158.1 non-coding downstream 851086 34279421 ~ 34279535 (-)
XLOC_009376 CR855379.2 non-coding downstream 1242954 33868661 ~ 33887667 (-)
XLOC_009377 NA non-coding downstream 1253290 33869579 ~ 33877331 (-)
XLOC_009371 NA non-coding downstream 1448943 33665924 ~ 33681678 (-)
XLOC_009405 CR848683.1 non-coding upstream 305822 35440740 ~ 35468800 (-)
XLOC_009406 NA non-coding upstream 479316 35614234 ~ 35675985 (-)
XLOC_009407 NA non-coding upstream 626763 35761681 ~ 35886373 (-)
XLOC_009408 CR854907.1 non-coding upstream 645122 35780040 ~ 35780805 (-)

Expression


Co-expression Network