G197051


Basic Information

Item Value
gene id G197051
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 4127613 ~ 4128009 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU223715
AATACATTCACCACGTTGTCATTATCATGTGACCTAGTTGCATCACTTCACTGTCATTCACAAATCCTCTCCCGTATCTCATGGGATAGTAAAGTGTCAATTATGTGCACACTCCAGAATCTCGCCGGAAGCAGTAGGTCATCCGGGTACTTTTTGCCTACTCTTTTATGAGTACTGTGAATTTGGACCTACTGCTCATGTCACGTACTGTTTTCTGCCTACTATATAGTAGGAAAGTATGTGATTTCGGATGCAGCCTCAGTTTTGTCCATCGGTTGTTGATTGGACAGAGGCAGATCTGAATGTGAGTTTACAGTTGCTTGTAAGAAAGGGGCAGAGTTTAAGAGGACTAAATGACTGGAGAAATCATTATTTTATTTAGATTAAACATTACGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223715 True 397 lncRNA 0.41 1 4127613 4128009

Neighbor

gene id symbol gene type direction distance location
CI01000046_04098044_04120141 LLGL1 coding upstream 7261 4096231 ~ 4120352 (+)
CI01000046_04081845_04083512 NA coding upstream 44078 4081721 ~ 4083535 (+)
CI01000046_04040958_04080846 NA coding upstream 46294 4040023 ~ 4081319 (+)
CI01000046_04024795_04028000 DRG2 coding upstream 99613 4024551 ~ 4028000 (+)
CI01000046_03998572_04009276 ZNF598 coding upstream 117397 3998572 ~ 4010216 (+)
CI01000046_04274035_04275654 B9D1 coding downstream 145843 4273852 ~ 4275762 (+)
CI01000046_04308380_04317709 GRAP, GRAPA coding downstream 180371 4308380 ~ 4317970 (+)
CI01000046_04319601_04326459 NA coding downstream 191592 4319601 ~ 4326532 (+)
CI01000046_04478947_04510165 ARHGAP23A coding downstream 350938 4478947 ~ 4511125 (+)
CI01000046_04532653_04542785 PLCD3, PLCD3A coding downstream 404644 4532653 ~ 4542785 (+)
G196867 NA non-coding upstream 425 4126877 ~ 4127188 (+)
G196871 NA non-coding upstream 1169 4125998 ~ 4126444 (+)
G197039 NA non-coding upstream 176785 3950585 ~ 3950828 (+)
G197024 NA non-coding upstream 212776 3914584 ~ 3914837 (+)
G196887 NA non-coding upstream 235772 3891020 ~ 3891841 (+)
G196870 NA non-coding downstream 496 4128505 ~ 4128795 (+)
G197052 NA non-coding downstream 6279 4134288 ~ 4137233 (+)
G197053 NA non-coding downstream 10637 4138646 ~ 4139099 (+)
G197054 NA non-coding downstream 14407 4142416 ~ 4143977 (+)
G197056 NA non-coding downstream 23714 4151723 ~ 4151967 (+)
CI01000046_03943890_03945302 ATP5J2 other upstream 182113 3943794 ~ 3945500 (+)
G196936 NA other upstream 933342 3186995 ~ 3194271 (+)
CI01000046_02451052_02454565 MAFK other upstream 1670333 2442395 ~ 2457280 (+)
CI01000046_01865451_01881353 NA other upstream 2168465 1865451 ~ 1881369 (+)
CI01000046_01540075_01668012 HS3ST4 other upstream 2564276 1539494 ~ 1668012 (+)
G197055 NA other downstream 21414 4149423 ~ 4149780 (+)
G197121 NA other downstream 243002 4371011 ~ 4371430 (+)
G196869 NA other downstream 287521 4415530 ~ 4421687 (+)
G197352 NA other downstream 1146373 5259318 ~ 5276453 (+)
G197528 NA other downstream 1598112 5726121 ~ 5742684 (+)

Expression


Co-expression Network