Gene
RNA
| Item | Value |
|---|---|
| gene id | G197053 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000046 |
| NCBI id | null |
| chromosome length | 7063170 |
| location | 4138646 ~ 4139099 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU223717 | True | 356 | lncRNA | 0.48 | 2 | 4138646 | 4139099 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000046_04098044_04120141 | LLGL1 | coding | upstream | 18294 | 4096231 ~ 4120352 (+) |
| CI01000046_04081845_04083512 | NA | coding | upstream | 55111 | 4081721 ~ 4083535 (+) |
| CI01000046_04040958_04080846 | NA | coding | upstream | 57327 | 4040023 ~ 4081319 (+) |
| CI01000046_04024795_04028000 | DRG2 | coding | upstream | 110646 | 4024551 ~ 4028000 (+) |
| CI01000046_03998572_04009276 | ZNF598 | coding | upstream | 128430 | 3998572 ~ 4010216 (+) |
| CI01000046_04274035_04275654 | B9D1 | coding | downstream | 134753 | 4273852 ~ 4275762 (+) |
| CI01000046_04308380_04317709 | GRAP, GRAPA | coding | downstream | 169281 | 4308380 ~ 4317970 (+) |
| CI01000046_04319601_04326459 | NA | coding | downstream | 180502 | 4319601 ~ 4326532 (+) |
| CI01000046_04478947_04510165 | ARHGAP23A | coding | downstream | 339848 | 4478947 ~ 4511125 (+) |
| CI01000046_04532653_04542785 | PLCD3, PLCD3A | coding | downstream | 393554 | 4532653 ~ 4542785 (+) |
| G197052 | NA | non-coding | upstream | 1413 | 4134288 ~ 4137233 (+) |
| G196870 | NA | non-coding | upstream | 9851 | 4128505 ~ 4128795 (+) |
| G197051 | NA | non-coding | upstream | 10637 | 4127613 ~ 4128009 (+) |
| G196867 | NA | non-coding | upstream | 11458 | 4126877 ~ 4127188 (+) |
| G196871 | NA | non-coding | upstream | 12202 | 4125998 ~ 4126444 (+) |
| G197054 | NA | non-coding | downstream | 3317 | 4142416 ~ 4143977 (+) |
| G197056 | NA | non-coding | downstream | 12624 | 4151723 ~ 4151967 (+) |
| G197060 | NA | non-coding | downstream | 22210 | 4161309 ~ 4161513 (+) |
| G197061 | NA | non-coding | downstream | 23488 | 4162587 ~ 4162788 (+) |
| G197058 | NA | non-coding | downstream | 27024 | 4166123 ~ 4166464 (+) |
| CI01000046_03943890_03945302 | ATP5J2 | other | upstream | 193146 | 3943794 ~ 3945500 (+) |
| G196936 | NA | other | upstream | 944375 | 3186995 ~ 3194271 (+) |
| CI01000046_02451052_02454565 | MAFK | other | upstream | 1681366 | 2442395 ~ 2457280 (+) |
| CI01000046_01865451_01881353 | NA | other | upstream | 2179498 | 1865451 ~ 1881369 (+) |
| CI01000046_01540075_01668012 | HS3ST4 | other | upstream | 2575309 | 1539494 ~ 1668012 (+) |
| G197055 | NA | other | downstream | 10324 | 4149423 ~ 4149780 (+) |
| G197121 | NA | other | downstream | 231912 | 4371011 ~ 4371430 (+) |
| G196869 | NA | other | downstream | 276431 | 4415530 ~ 4421687 (+) |
| G197352 | NA | other | downstream | 1135283 | 5259318 ~ 5276453 (+) |
| G197528 | NA | other | downstream | 1587022 | 5726121 ~ 5742684 (+) |
