G197061


Basic Information

Item Value
gene id G197061
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 4162587 ~ 4162788 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU223726
TAATAACAATAATAATAATAATAAACTGACAGCATTTTATTTATTAAAAAACAAAGAGAGTCTTGTATTTGCCGTCTTAGCCAATAGGCCTAAAATTATCTTTTATAACAAGATTCTGTCCAAATGTAAACCTATTAAATGAAAGGAAAAACTATCATCGGTTTATAAATTAAAGTTTTTTTTTAAGATATTTTAAAATGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223726 True 202 lncRNA 0.22 1 4162587 4162788

Neighbor

gene id symbol gene type direction distance location
CI01000046_04098044_04120141 LLGL1 coding upstream 42235 4096231 ~ 4120352 (+)
CI01000046_04081845_04083512 NA coding upstream 79052 4081721 ~ 4083535 (+)
CI01000046_04040958_04080846 NA coding upstream 81268 4040023 ~ 4081319 (+)
CI01000046_04024795_04028000 DRG2 coding upstream 134587 4024551 ~ 4028000 (+)
CI01000046_03998572_04009276 ZNF598 coding upstream 152371 3998572 ~ 4010216 (+)
CI01000046_04274035_04275654 B9D1 coding downstream 111064 4273852 ~ 4275762 (+)
CI01000046_04308380_04317709 GRAP, GRAPA coding downstream 145592 4308380 ~ 4317970 (+)
CI01000046_04319601_04326459 NA coding downstream 156813 4319601 ~ 4326532 (+)
CI01000046_04478947_04510165 ARHGAP23A coding downstream 316159 4478947 ~ 4511125 (+)
CI01000046_04532653_04542785 PLCD3, PLCD3A coding downstream 369865 4532653 ~ 4542785 (+)
G197060 NA non-coding upstream 1074 4161309 ~ 4161513 (+)
G197056 NA non-coding upstream 10620 4151723 ~ 4151967 (+)
G197054 NA non-coding upstream 18610 4142416 ~ 4143977 (+)
G197053 NA non-coding upstream 23488 4138646 ~ 4139099 (+)
G197052 NA non-coding upstream 25354 4134288 ~ 4137233 (+)
G197058 NA non-coding downstream 3335 4166123 ~ 4166464 (+)
G197062 NA non-coding downstream 5328 4168116 ~ 4168421 (+)
G197057 NA non-coding downstream 6161 4168949 ~ 4169652 (+)
G197063 NA non-coding downstream 8171 4170959 ~ 4171342 (+)
G197064 NA non-coding downstream 9599 4172387 ~ 4172634 (+)
G197055 NA other upstream 12807 4149423 ~ 4149780 (+)
CI01000046_03943890_03945302 ATP5J2 other upstream 217087 3943794 ~ 3945500 (+)
G196936 NA other upstream 968316 3186995 ~ 3194271 (+)
CI01000046_02451052_02454565 MAFK other upstream 1705307 2442395 ~ 2457280 (+)
CI01000046_01865451_01881353 NA other upstream 2203439 1865451 ~ 1881369 (+)
G197121 NA other downstream 208223 4371011 ~ 4371430 (+)
G196869 NA other downstream 252742 4415530 ~ 4421687 (+)
G197352 NA other downstream 1111594 5259318 ~ 5276453 (+)
G197528 NA other downstream 1563333 5726121 ~ 5742684 (+)
CI01000046_06808895_06820945 GSPT1, ERF3B, GSPT1L other downstream 2657150 6808507 ~ 6821543 (+)

Expression


Co-expression Network