Gene
RNA
| Item | Value |
|---|---|
| gene id | G197062 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000046 |
| NCBI id | null |
| chromosome length | 7063170 |
| location | 4168116 ~ 4168421 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU223727 | True | 306 | lncRNA | 0.55 | 1 | 4168116 | 4168421 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000046_04098044_04120141 | LLGL1 | coding | upstream | 47764 | 4096231 ~ 4120352 (+) |
| CI01000046_04081845_04083512 | NA | coding | upstream | 84581 | 4081721 ~ 4083535 (+) |
| CI01000046_04040958_04080846 | NA | coding | upstream | 86797 | 4040023 ~ 4081319 (+) |
| CI01000046_04024795_04028000 | DRG2 | coding | upstream | 140116 | 4024551 ~ 4028000 (+) |
| CI01000046_03998572_04009276 | ZNF598 | coding | upstream | 157900 | 3998572 ~ 4010216 (+) |
| CI01000046_04274035_04275654 | B9D1 | coding | downstream | 105431 | 4273852 ~ 4275762 (+) |
| CI01000046_04308380_04317709 | GRAP, GRAPA | coding | downstream | 139959 | 4308380 ~ 4317970 (+) |
| CI01000046_04319601_04326459 | NA | coding | downstream | 151180 | 4319601 ~ 4326532 (+) |
| CI01000046_04478947_04510165 | ARHGAP23A | coding | downstream | 310526 | 4478947 ~ 4511125 (+) |
| CI01000046_04532653_04542785 | PLCD3, PLCD3A | coding | downstream | 364232 | 4532653 ~ 4542785 (+) |
| G197058 | NA | non-coding | upstream | 1652 | 4166123 ~ 4166464 (+) |
| G197061 | NA | non-coding | upstream | 5328 | 4162587 ~ 4162788 (+) |
| G197060 | NA | non-coding | upstream | 6603 | 4161309 ~ 4161513 (+) |
| G197056 | NA | non-coding | upstream | 16149 | 4151723 ~ 4151967 (+) |
| G197054 | NA | non-coding | upstream | 24139 | 4142416 ~ 4143977 (+) |
| G197057 | NA | non-coding | downstream | 528 | 4168949 ~ 4169652 (+) |
| G197063 | NA | non-coding | downstream | 2538 | 4170959 ~ 4171342 (+) |
| G197064 | NA | non-coding | downstream | 3966 | 4172387 ~ 4172634 (+) |
| G197059 | NA | non-coding | downstream | 4594 | 4173015 ~ 4173584 (+) |
| G197065 | NA | non-coding | downstream | 8011 | 4176432 ~ 4176647 (+) |
| G197055 | NA | other | upstream | 18336 | 4149423 ~ 4149780 (+) |
| CI01000046_03943890_03945302 | ATP5J2 | other | upstream | 222616 | 3943794 ~ 3945500 (+) |
| G196936 | NA | other | upstream | 973845 | 3186995 ~ 3194271 (+) |
| CI01000046_02451052_02454565 | MAFK | other | upstream | 1710836 | 2442395 ~ 2457280 (+) |
| CI01000046_01865451_01881353 | NA | other | upstream | 2208968 | 1865451 ~ 1881369 (+) |
| G197121 | NA | other | downstream | 202590 | 4371011 ~ 4371430 (+) |
| G196869 | NA | other | downstream | 247109 | 4415530 ~ 4421687 (+) |
| G197352 | NA | other | downstream | 1105961 | 5259318 ~ 5276453 (+) |
| G197528 | NA | other | downstream | 1557700 | 5726121 ~ 5742684 (+) |
| CI01000046_06808895_06820945 | GSPT1, ERF3B, GSPT1L | other | downstream | 2651517 | 6808507 ~ 6821543 (+) |
