G197066


Basic Information

Item Value
gene id G197066
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 4178716 ~ 4178936 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU223731
CCCGTTCACACCAAGAACGATAACTATAAAGATAACGAAAAAGACATAGTTAAAAAAAATCGTTCTAAATATAAAAGAATAGCACTGTCGACACCACAGATATAACGATAATGATATAGAGAAACAATATCGTTGGGATCACTTTCAGAATGATTTTTTTCCAGTTGTTGAACAATAAAATACTGAATCCGTTCTAATTCAAGGGCTTGCACATTTAAAAT

Function

NR:

description
G1/S-specific cyclin-D2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223731 True 221 lncRNA 0.31 1 4178716 4178936

Neighbor

gene id symbol gene type direction distance location
CI01000046_04098044_04120141 LLGL1 coding upstream 58364 4096231 ~ 4120352 (+)
CI01000046_04081845_04083512 NA coding upstream 95181 4081721 ~ 4083535 (+)
CI01000046_04040958_04080846 NA coding upstream 97397 4040023 ~ 4081319 (+)
CI01000046_04024795_04028000 DRG2 coding upstream 150716 4024551 ~ 4028000 (+)
CI01000046_03998572_04009276 ZNF598 coding upstream 168500 3998572 ~ 4010216 (+)
CI01000046_04274035_04275654 B9D1 coding downstream 94916 4273852 ~ 4275762 (+)
CI01000046_04308380_04317709 GRAP, GRAPA coding downstream 129444 4308380 ~ 4317970 (+)
CI01000046_04319601_04326459 NA coding downstream 140665 4319601 ~ 4326532 (+)
CI01000046_04478947_04510165 ARHGAP23A coding downstream 300011 4478947 ~ 4511125 (+)
CI01000046_04532653_04542785 PLCD3, PLCD3A coding downstream 353717 4532653 ~ 4542785 (+)
G197065 NA non-coding upstream 2069 4176432 ~ 4176647 (+)
G197059 NA non-coding upstream 5132 4173015 ~ 4173584 (+)
G197064 NA non-coding upstream 6082 4172387 ~ 4172634 (+)
G197063 NA non-coding upstream 7374 4170959 ~ 4171342 (+)
G197057 NA non-coding upstream 9064 4168949 ~ 4169652 (+)
G197067 NA non-coding downstream 4928 4183864 ~ 4184256 (+)
G197068 NA non-coding downstream 6771 4185707 ~ 4236672 (+)
G197069 NA non-coding downstream 59581 4238517 ~ 4238805 (+)
G197095 NA non-coding downstream 65514 4244450 ~ 4244889 (+)
G197099 NA non-coding downstream 76318 4255254 ~ 4255462 (+)
G197055 NA other upstream 28936 4149423 ~ 4149780 (+)
CI01000046_03943890_03945302 ATP5J2 other upstream 233216 3943794 ~ 3945500 (+)
G196936 NA other upstream 984445 3186995 ~ 3194271 (+)
CI01000046_02451052_02454565 MAFK other upstream 1721436 2442395 ~ 2457280 (+)
CI01000046_01865451_01881353 NA other upstream 2219568 1865451 ~ 1881369 (+)
G197121 NA other downstream 192075 4371011 ~ 4371430 (+)
G196869 NA other downstream 236594 4415530 ~ 4421687 (+)
G197352 NA other downstream 1095446 5259318 ~ 5276453 (+)
G197528 NA other downstream 1547185 5726121 ~ 5742684 (+)
CI01000046_06808895_06820945 GSPT1, ERF3B, GSPT1L other downstream 2641002 6808507 ~ 6821543 (+)

Expression


Co-expression Network