Gene
RNA
| Item | Value |
|---|---|
| gene id | G197095 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000046 |
| NCBI id | null |
| chromosome length | 7063170 |
| location | 4244450 ~ 4244889 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU223760 | True | 440 | lncRNA | 0.50 | 1 | 4244450 | 4244889 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000046_04098044_04120141 | LLGL1 | coding | upstream | 124098 | 4096231 ~ 4120352 (+) |
| CI01000046_04081845_04083512 | NA | coding | upstream | 160915 | 4081721 ~ 4083535 (+) |
| CI01000046_04040958_04080846 | NA | coding | upstream | 163131 | 4040023 ~ 4081319 (+) |
| CI01000046_04024795_04028000 | DRG2 | coding | upstream | 216450 | 4024551 ~ 4028000 (+) |
| CI01000046_03998572_04009276 | ZNF598 | coding | upstream | 234234 | 3998572 ~ 4010216 (+) |
| CI01000046_04274035_04275654 | B9D1 | coding | downstream | 28963 | 4273852 ~ 4275762 (+) |
| CI01000046_04308380_04317709 | GRAP, GRAPA | coding | downstream | 63491 | 4308380 ~ 4317970 (+) |
| CI01000046_04319601_04326459 | NA | coding | downstream | 74712 | 4319601 ~ 4326532 (+) |
| CI01000046_04478947_04510165 | ARHGAP23A | coding | downstream | 234058 | 4478947 ~ 4511125 (+) |
| CI01000046_04532653_04542785 | PLCD3, PLCD3A | coding | downstream | 287764 | 4532653 ~ 4542785 (+) |
| G197069 | NA | non-coding | upstream | 5645 | 4238517 ~ 4238805 (+) |
| G197068 | NA | non-coding | upstream | 7778 | 4185707 ~ 4236672 (+) |
| G197067 | NA | non-coding | upstream | 60194 | 4183864 ~ 4184256 (+) |
| G197066 | NA | non-coding | upstream | 65514 | 4178716 ~ 4178936 (+) |
| G197065 | NA | non-coding | upstream | 67803 | 4176432 ~ 4176647 (+) |
| G197099 | NA | non-coding | downstream | 10365 | 4255254 ~ 4255462 (+) |
| G197103 | NA | non-coding | downstream | 22589 | 4267478 ~ 4267872 (+) |
| G196861 | NA | non-coding | downstream | 32541 | 4277430 ~ 4280227 (+) |
| G197106 | NA | non-coding | downstream | 46858 | 4291747 ~ 4292809 (+) |
| G197107 | NA | non-coding | downstream | 48733 | 4293622 ~ 4293821 (+) |
| G197055 | NA | other | upstream | 94670 | 4149423 ~ 4149780 (+) |
| CI01000046_03943890_03945302 | ATP5J2 | other | upstream | 298950 | 3943794 ~ 3945500 (+) |
| G196936 | NA | other | upstream | 1050179 | 3186995 ~ 3194271 (+) |
| CI01000046_02451052_02454565 | MAFK | other | upstream | 1787170 | 2442395 ~ 2457280 (+) |
| CI01000046_01865451_01881353 | NA | other | upstream | 2285302 | 1865451 ~ 1881369 (+) |
| G197121 | NA | other | downstream | 126122 | 4371011 ~ 4371430 (+) |
| G196869 | NA | other | downstream | 170641 | 4415530 ~ 4421687 (+) |
| G197352 | NA | other | downstream | 1029493 | 5259318 ~ 5276453 (+) |
| G197528 | NA | other | downstream | 1481232 | 5726121 ~ 5742684 (+) |
| CI01000046_06808895_06820945 | GSPT1, ERF3B, GSPT1L | other | downstream | 2575049 | 6808507 ~ 6821543 (+) |
