G197099


Basic Information

Item Value
gene id G197099
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 4255254 ~ 4255462 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU223765
GTTATTTTTATGGCAGTGGTGCTATATAGCACCTTAACCACCCCAAAGAACTACTGAAGAACCATACAGGGGCTTAACAGGTTCTGTATACGGTAGCAGTGCTATATAGCACCTCAGTCATCCCAAAGAACCAGTGAAGAACCACTTGAAGCACCAAGATTTGGTTCTTTACAGCACTTAAAGTGGTTCCCCTATGATTATGAGCCAAA

Function

NR:

description
metaxin-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223765 True 209 lncRNA 0.43 1 4255254 4255462

Neighbor

gene id symbol gene type direction distance location
CI01000046_04098044_04120141 LLGL1 coding upstream 134902 4096231 ~ 4120352 (+)
CI01000046_04081845_04083512 NA coding upstream 171719 4081721 ~ 4083535 (+)
CI01000046_04040958_04080846 NA coding upstream 173935 4040023 ~ 4081319 (+)
CI01000046_04024795_04028000 DRG2 coding upstream 227254 4024551 ~ 4028000 (+)
CI01000046_03998572_04009276 ZNF598 coding upstream 245038 3998572 ~ 4010216 (+)
CI01000046_04274035_04275654 B9D1 coding downstream 18390 4273852 ~ 4275762 (+)
CI01000046_04308380_04317709 GRAP, GRAPA coding downstream 52918 4308380 ~ 4317970 (+)
CI01000046_04319601_04326459 NA coding downstream 64139 4319601 ~ 4326532 (+)
CI01000046_04478947_04510165 ARHGAP23A coding downstream 223485 4478947 ~ 4511125 (+)
CI01000046_04532653_04542785 PLCD3, PLCD3A coding downstream 277191 4532653 ~ 4542785 (+)
G197095 NA non-coding upstream 10365 4244450 ~ 4244889 (+)
G197069 NA non-coding upstream 16449 4238517 ~ 4238805 (+)
G197068 NA non-coding upstream 18582 4185707 ~ 4236672 (+)
G197067 NA non-coding upstream 70998 4183864 ~ 4184256 (+)
G197066 NA non-coding upstream 76318 4178716 ~ 4178936 (+)
G197103 NA non-coding downstream 12016 4267478 ~ 4267872 (+)
G196861 NA non-coding downstream 21968 4277430 ~ 4280227 (+)
G197106 NA non-coding downstream 36285 4291747 ~ 4292809 (+)
G197107 NA non-coding downstream 38160 4293622 ~ 4293821 (+)
G196879 NA non-coding downstream 41755 4297217 ~ 4297982 (+)
G197055 NA other upstream 105474 4149423 ~ 4149780 (+)
CI01000046_03943890_03945302 ATP5J2 other upstream 309754 3943794 ~ 3945500 (+)
G196936 NA other upstream 1060983 3186995 ~ 3194271 (+)
CI01000046_02451052_02454565 MAFK other upstream 1797974 2442395 ~ 2457280 (+)
CI01000046_01865451_01881353 NA other upstream 2296106 1865451 ~ 1881369 (+)
G197121 NA other downstream 115549 4371011 ~ 4371430 (+)
G196869 NA other downstream 160068 4415530 ~ 4421687 (+)
G197352 NA other downstream 1018920 5259318 ~ 5276453 (+)
G197528 NA other downstream 1470659 5726121 ~ 5742684 (+)
CI01000046_06808895_06820945 GSPT1, ERF3B, GSPT1L other downstream 2564476 6808507 ~ 6821543 (+)

Expression


Co-expression Network