G197107


Basic Information

Item Value
gene id G197107
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 4293622 ~ 4293821 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU223773
CAGGACTACCACATTTTTAGGGTAATATGTAAATGCATGACTAGTAATTTTGGAGATTACACTTACCAACATGTTTAGAAAGTACTTCTATCCACATTATTCATTTAGTTATTTTGTTTAGGATCCCAGGACAATTTTGATATTGTGCTTCTGCTTGATATTACTAAAAACAATATCCAAATTTCATGTCATTTTTAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223773 True 200 lncRNA 0.29 1 4293622 4293821

Neighbor

gene id symbol gene type direction distance location
CI01000046_04274035_04275654 B9D1 coding upstream 17860 4273852 ~ 4275762 (+)
CI01000046_04098044_04120141 LLGL1 coding upstream 173270 4096231 ~ 4120352 (+)
CI01000046_04081845_04083512 NA coding upstream 210087 4081721 ~ 4083535 (+)
CI01000046_04040958_04080846 NA coding upstream 212303 4040023 ~ 4081319 (+)
CI01000046_04024795_04028000 DRG2 coding upstream 265622 4024551 ~ 4028000 (+)
CI01000046_04308380_04317709 GRAP, GRAPA coding downstream 14559 4308380 ~ 4317970 (+)
CI01000046_04319601_04326459 NA coding downstream 25780 4319601 ~ 4326532 (+)
CI01000046_04478947_04510165 ARHGAP23A coding downstream 185126 4478947 ~ 4511125 (+)
CI01000046_04532653_04542785 PLCD3, PLCD3A coding downstream 238832 4532653 ~ 4542785 (+)
CI01000046_04545960_04557955 NMT1A, NMT1 coding downstream 252139 4545960 ~ 4558453 (+)
G197106 NA non-coding upstream 813 4291747 ~ 4292809 (+)
G196861 NA non-coding upstream 13395 4277430 ~ 4280227 (+)
G197103 NA non-coding upstream 25750 4267478 ~ 4267872 (+)
G197099 NA non-coding upstream 38160 4255254 ~ 4255462 (+)
G197095 NA non-coding upstream 48733 4244450 ~ 4244889 (+)
G196879 NA non-coding downstream 3396 4297217 ~ 4297982 (+)
G196866 NA non-coding downstream 35056 4328877 ~ 4329902 (+)
G196892 NA non-coding downstream 41165 4334986 ~ 4335276 (+)
G196888 NA non-coding downstream 49777 4343598 ~ 4343875 (+)
G197109 NA non-coding downstream 56826 4350647 ~ 4350867 (+)
G197055 NA other upstream 143842 4149423 ~ 4149780 (+)
CI01000046_03943890_03945302 ATP5J2 other upstream 348122 3943794 ~ 3945500 (+)
G196936 NA other upstream 1099351 3186995 ~ 3194271 (+)
CI01000046_02451052_02454565 MAFK other upstream 1836342 2442395 ~ 2457280 (+)
CI01000046_01865451_01881353 NA other upstream 2334474 1865451 ~ 1881369 (+)
G197121 NA other downstream 77190 4371011 ~ 4371430 (+)
G196869 NA other downstream 121709 4415530 ~ 4421687 (+)
G197352 NA other downstream 980561 5259318 ~ 5276453 (+)
G197528 NA other downstream 1432300 5726121 ~ 5742684 (+)
CI01000046_06808895_06820945 GSPT1, ERF3B, GSPT1L other downstream 2526117 6808507 ~ 6821543 (+)

Expression


Co-expression Network