G197114


Basic Information

Item Value
gene id G197114
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 4359289 ~ 4359687 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU223782
CCTAGGTGTATATGACTTTCTTCTTTCAGTCGATCACAATCTGAGTTATATCCTGGCTCTTCCAAGCTTTGTAATGCCATTGAACAGTGCCCGAGTATTTGAAGCTCCAAAAAGTTCATCCATCCATCATAAAAGTAATCCATATGACTCTAGTGGGTTAATAAGTGCCTTCTGAAGCGAAGCGATGGGTTTTTGTAAGAAAAATGTCCACATATAAAACATTATGGCCTGGTTTCACAGACAGGGCTTAGATTAAGTCAGGATTAGGCCTTAGTTCATTTAAGTATCTTTTATAAATGTGCCTTAGAAAAAAACATTACTGACATCCATCTTGAGACAAAACAATGGCACTGACATATTTTAAGATAAGTCCCCCTCTCTCTCTCTCTCTCTCTCTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223782 True 399 lncRNA 0.38 1 4359289 4359687

Neighbor

gene id symbol gene type direction distance location
CI01000046_04319601_04326459 NA coding upstream 32757 4319601 ~ 4326532 (+)
CI01000046_04308380_04317709 GRAP, GRAPA coding upstream 41319 4308380 ~ 4317970 (+)
CI01000046_04274035_04275654 B9D1 coding upstream 83527 4273852 ~ 4275762 (+)
CI01000046_04098044_04120141 LLGL1 coding upstream 238937 4096231 ~ 4120352 (+)
CI01000046_04081845_04083512 NA coding upstream 275754 4081721 ~ 4083535 (+)
CI01000046_04478947_04510165 ARHGAP23A coding downstream 119260 4478947 ~ 4511125 (+)
CI01000046_04532653_04542785 PLCD3, PLCD3A coding downstream 172966 4532653 ~ 4542785 (+)
CI01000046_04545960_04557955 NMT1A, NMT1 coding downstream 186273 4545960 ~ 4558453 (+)
CI01000046_04563154_04565515 NA coding downstream 203400 4563087 ~ 4565727 (+)
CI01000046_04579543_04581492 NA coding downstream 219594 4579281 ~ 4581540 (+)
G197113 NA non-coding upstream 489 4358500 ~ 4358800 (+)
G197112 NA non-coding upstream 808 4357157 ~ 4358481 (+)
G197111 NA non-coding upstream 2486 4356565 ~ 4356803 (+)
G196834 NA non-coding upstream 6055 4351486 ~ 4353234 (+)
G197109 NA non-coding upstream 8422 4350647 ~ 4350867 (+)
G197115 NA non-coding downstream 535 4360222 ~ 4360500 (+)
G197119 NA non-coding downstream 9269 4368956 ~ 4369202 (+)
G197124 NA non-coding downstream 14595 4374282 ~ 4379788 (+)
G197125 NA non-coding downstream 22591 4382278 ~ 4382492 (+)
G197130 NA non-coding downstream 37831 4397518 ~ 4397830 (+)
G197055 NA other upstream 209509 4149423 ~ 4149780 (+)
CI01000046_03943890_03945302 ATP5J2 other upstream 413789 3943794 ~ 3945500 (+)
G196936 NA other upstream 1165018 3186995 ~ 3194271 (+)
CI01000046_02451052_02454565 MAFK other upstream 1902009 2442395 ~ 2457280 (+)
CI01000046_01865451_01881353 NA other upstream 2400141 1865451 ~ 1881369 (+)
G197121 NA other downstream 11324 4371011 ~ 4371430 (+)
G196869 NA other downstream 55843 4415530 ~ 4421687 (+)
G197352 NA other downstream 914695 5259318 ~ 5276453 (+)
G197528 NA other downstream 1366434 5726121 ~ 5742684 (+)
CI01000046_06808895_06820945 GSPT1, ERF3B, GSPT1L other downstream 2460251 6808507 ~ 6821543 (+)

Expression


Co-expression Network