XLOC_009408 (CR854907.1)


Basic Information

Item Value
gene id XLOC_009408
gene name CR854907.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 35780040 ~ 35780805 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018498
CTTGGCATAAACTCACTGAGGGCagattaacccttgtgtactgctcaaattgactaccctttcattatgttggtggctgtttttgccccattgacttctattataatgacattttttgattgcaaagtcccagagtggatgaaaacatcctcaacagcaCACAAATGTGAGAGCCTCTCCAGAGCATGATCGCAAGACAGCCTTGATCTGGACcgaacacaaacaacacacacaaacgcatCTACGTTGACAGATGATGAACCACGCCGAAAAAAGCGCACAGCAGCAGAAGCGGCAGAGCAGCAGACAGGAGAGAATTTACACACAGCCATGGGGGTCAGAGGTCAAAGACACGGAGACAGGAGCCCACAACTCCACACGCATGCCATCTCGCATCACTCTGAGGAATAAGGGGGTTCTACCTGGAACGGCGTCCCGCACGGAGGGGCCGAGGCGTCTGGTGCGTGTCTTTGGGGTGTTCCCACTGGAGACGGGACTCCTGATGTGGACGCAGAGCGACCGAGTTTACAACCGGCTTTTGGTTCTATAAAGtgttgggttgcagctggaaaggcatccgctgcataatacatatgatggataagttggcggttcaattcgctgtggcgaccccaggttaataaag

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097386

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018498 True 646 lncRNA 0.50 2 35780040 35780805

Neighbor

gene id symbol gene type direction distance location
XLOC_009406 NA coding downstream 104055 35614234 ~ 35675985 (-)
XLOC_009404 CR848683.2 coding downstream 118672 35414466 ~ 35661368 (-)
XLOC_009405 CR848683.1 coding downstream 311240 35440740 ~ 35468800 (-)
XLOC_009403 mecom coding downstream 369180 35372907 ~ 35410860 (-)
XLOC_009402 mff coding downstream 527492 35226673 ~ 35252548 (-)
XLOC_009409 irs1 coding upstream 107744 35888549 ~ 35930070 (-)
XLOC_009410 col4a4 coding upstream 171083 35951888 ~ 36055401 (-)
XLOC_009411 ostn coding upstream 448030 36228835 ~ 36249087 (-)
XLOC_009412 si:dkey-23k10.2 coding upstream 548563 36329368 ~ 36347895 (-)
XLOC_009413 si:dkey-23k10.5 coding upstream 568204 36349009 ~ 36357889 (-)
XLOC_009389 NA non-coding downstream 1172634 34602522 ~ 34607406 (-)
XLOC_009383 FP017158.1 non-coding downstream 1500505 34279421 ~ 34279535 (-)
XLOC_009415 NA non-coding upstream 640786 36421591 ~ 36437846 (-)
XLOC_009416 NA non-coding upstream 719401 36500206 ~ 36503189 (-)
XLOC_009419 NA non-coding upstream 1003674 36784479 ~ 36784773 (-)
XLOC_009420 AL953844.1 non-coding upstream 1093446 36874251 ~ 36874366 (-)
XLOC_009422 CR848749.2 non-coding upstream 1478549 37259354 ~ 37264265 (-)

Expression


Co-expression Network