G197136


Basic Information

Item Value
gene id G197136
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 4421736 ~ 4421959 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU223806
AACCAGTTTCCTACACGCCCACACACTCTCTCATCACATTTAAATAAGACATGCCTCCCATCTGTAAACTCCACTGTTCATTTGTGTTACTTATTGAGCAACCGGTATGTCTGAAAGTGTGATAAGAGACCTGTTGACGACTCTCAGTCTCACCTGTGCAACTCTGAATTCTGAAACTTGTAAAAAATGTGTTAAAAATAAGGTGTTCGTTTCAAATGGATTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223806 True 224 lncRNA 0.39 1 4421736 4421959

Neighbor

gene id symbol gene type direction distance location
CI01000046_04319601_04326459 NA coding upstream 95204 4319601 ~ 4326532 (+)
CI01000046_04308380_04317709 GRAP, GRAPA coding upstream 103766 4308380 ~ 4317970 (+)
CI01000046_04274035_04275654 B9D1 coding upstream 145974 4273852 ~ 4275762 (+)
CI01000046_04098044_04120141 LLGL1 coding upstream 301384 4096231 ~ 4120352 (+)
CI01000046_04081845_04083512 NA coding upstream 338201 4081721 ~ 4083535 (+)
CI01000046_04478947_04510165 ARHGAP23A coding downstream 56988 4478947 ~ 4511125 (+)
CI01000046_04532653_04542785 PLCD3, PLCD3A coding downstream 110694 4532653 ~ 4542785 (+)
CI01000046_04545960_04557955 NMT1A, NMT1 coding downstream 124001 4545960 ~ 4558453 (+)
CI01000046_04563154_04565515 NA coding downstream 141128 4563087 ~ 4565727 (+)
CI01000046_04579543_04581492 NA coding downstream 157322 4579281 ~ 4581540 (+)
G197135 NA non-coding upstream 8387 4412862 ~ 4413349 (+)
G197130 NA non-coding upstream 23906 4397518 ~ 4397830 (+)
G197125 NA non-coding upstream 39244 4382278 ~ 4382492 (+)
G197124 NA non-coding upstream 41948 4374282 ~ 4379788 (+)
G197119 NA non-coding upstream 52534 4368956 ~ 4369202 (+)
G197140 NA non-coding downstream 13919 4435878 ~ 4436252 (+)
G196889 NA non-coding downstream 15278 4437237 ~ 4443882 (+)
G197153 NA non-coding downstream 219222 4641181 ~ 4643913 (+)
G197158 NA non-coding downstream 226991 4648950 ~ 4708769 (+)
G197156 NA non-coding downstream 236048 4658007 ~ 4684792 (+)
G196869 NA other upstream 49 4415530 ~ 4421687 (+)
G197121 NA other upstream 50306 4371011 ~ 4371430 (+)
G197055 NA other upstream 271956 4149423 ~ 4149780 (+)
CI01000046_03943890_03945302 ATP5J2 other upstream 476236 3943794 ~ 3945500 (+)
G196936 NA other upstream 1227465 3186995 ~ 3194271 (+)
G197352 NA other downstream 852423 5259318 ~ 5276453 (+)
G197528 NA other downstream 1304162 5726121 ~ 5742684 (+)
CI01000046_06808895_06820945 GSPT1, ERF3B, GSPT1L other downstream 2397979 6808507 ~ 6821543 (+)

Expression


Co-expression Network