Gene
RNA
| Item | Value |
|---|---|
| gene id | G196889 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000046 |
| NCBI id | null |
| chromosome length | 7063170 |
| location | 4437237 ~ 4443882 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU223550 | True | 6625 | lncRNA | 0.39 | 2 | 4437237 | 4443882 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000046_04319601_04326459 | NA | coding | upstream | 110705 | 4319601 ~ 4326532 (+) |
| CI01000046_04308380_04317709 | GRAP, GRAPA | coding | upstream | 119267 | 4308380 ~ 4317970 (+) |
| CI01000046_04274035_04275654 | B9D1 | coding | upstream | 161475 | 4273852 ~ 4275762 (+) |
| CI01000046_04098044_04120141 | LLGL1 | coding | upstream | 316885 | 4096231 ~ 4120352 (+) |
| CI01000046_04081845_04083512 | NA | coding | upstream | 353702 | 4081721 ~ 4083535 (+) |
| CI01000046_04478947_04510165 | ARHGAP23A | coding | downstream | 35065 | 4478947 ~ 4511125 (+) |
| CI01000046_04532653_04542785 | PLCD3, PLCD3A | coding | downstream | 88771 | 4532653 ~ 4542785 (+) |
| CI01000046_04545960_04557955 | NMT1A, NMT1 | coding | downstream | 102078 | 4545960 ~ 4558453 (+) |
| CI01000046_04563154_04565515 | NA | coding | downstream | 119205 | 4563087 ~ 4565727 (+) |
| CI01000046_04579543_04581492 | NA | coding | downstream | 135399 | 4579281 ~ 4581540 (+) |
| G197140 | NA | non-coding | upstream | 985 | 4435878 ~ 4436252 (+) |
| G197136 | NA | non-coding | upstream | 15278 | 4421736 ~ 4421959 (+) |
| G197135 | NA | non-coding | upstream | 23888 | 4412862 ~ 4413349 (+) |
| G197130 | NA | non-coding | upstream | 39407 | 4397518 ~ 4397830 (+) |
| G197125 | NA | non-coding | upstream | 54745 | 4382278 ~ 4382492 (+) |
| G197153 | NA | non-coding | downstream | 197299 | 4641181 ~ 4643913 (+) |
| G197158 | NA | non-coding | downstream | 205068 | 4648950 ~ 4708769 (+) |
| G197156 | NA | non-coding | downstream | 214125 | 4658007 ~ 4684792 (+) |
| G197169 | NA | non-coding | downstream | 278307 | 4722189 ~ 4736190 (+) |
| G197170 | NA | non-coding | downstream | 292382 | 4736264 ~ 4744725 (+) |
| G196869 | NA | other | upstream | 15550 | 4415530 ~ 4421687 (+) |
| G197121 | NA | other | upstream | 65807 | 4371011 ~ 4371430 (+) |
| G197055 | NA | other | upstream | 287457 | 4149423 ~ 4149780 (+) |
| CI01000046_03943890_03945302 | ATP5J2 | other | upstream | 491737 | 3943794 ~ 3945500 (+) |
| G196936 | NA | other | upstream | 1242966 | 3186995 ~ 3194271 (+) |
| G197352 | NA | other | downstream | 830500 | 5259318 ~ 5276453 (+) |
| G197528 | NA | other | downstream | 1282239 | 5726121 ~ 5742684 (+) |
| CI01000046_06808895_06820945 | GSPT1, ERF3B, GSPT1L | other | downstream | 2376056 | 6808507 ~ 6821543 (+) |
