Gene
RNA
| Item | Value |
|---|---|
| gene id | G197153 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000046 |
| NCBI id | null |
| chromosome length | 7063170 |
| location | 4641181 ~ 4643913 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU223839 | False | 1013 | lncRNA | 0.43 | 3 | 4641181 | 4643913 |
| TU223838 | True | 505 | lncRNA | 0.41 | 2 | 4643313 | 4643913 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000046_04615766_04638586 | NA | coding | upstream | 2239 | 4615766 ~ 4638942 (+) |
| CI01000046_04602081_04604842 | CDK21 | coding | upstream | 35560 | 4602081 ~ 4605621 (+) |
| CI01000046_04594068_04600391 | RETSAT | coding | upstream | 40193 | 4593711 ~ 4600988 (+) |
| CI01000046_04584213_04592141 | NA | coding | upstream | 48891 | 4583662 ~ 4592290 (+) |
| CI01000046_04579543_04581492 | NA | coding | upstream | 59641 | 4579281 ~ 4581540 (+) |
| CI01000046_04694468_04701075 | NA | coding | downstream | 49742 | 4693655 ~ 4701253 (+) |
| CI01000046_04806234_04808207 | NA | coding | downstream | 161442 | 4805355 ~ 4808335 (+) |
| CI01000046_04811748_04819011 | ZNF281A | coding | downstream | 167697 | 4811610 ~ 4819368 (+) |
| CI01000046_04841558_04852685 | NA | coding | downstream | 197645 | 4841558 ~ 4853176 (+) |
| CI01000046_04861221_04879259 | MPP3A, MPP3 | coding | downstream | 217308 | 4861221 ~ 4880669 (+) |
| G196889 | NA | non-coding | upstream | 197299 | 4437237 ~ 4443882 (+) |
| G197140 | NA | non-coding | upstream | 204929 | 4435878 ~ 4436252 (+) |
| G197136 | NA | non-coding | upstream | 219222 | 4421736 ~ 4421959 (+) |
| G197135 | NA | non-coding | upstream | 227832 | 4412862 ~ 4413349 (+) |
| G197130 | NA | non-coding | upstream | 243351 | 4397518 ~ 4397830 (+) |
| G197158 | NA | non-coding | downstream | 5037 | 4648950 ~ 4708769 (+) |
| G197156 | NA | non-coding | downstream | 14094 | 4658007 ~ 4684792 (+) |
| G197169 | NA | non-coding | downstream | 78276 | 4722189 ~ 4736190 (+) |
| G197170 | NA | non-coding | downstream | 92351 | 4736264 ~ 4744725 (+) |
| G197172 | NA | non-coding | downstream | 100949 | 4744862 ~ 4746106 (+) |
| G196869 | NA | other | upstream | 219494 | 4415530 ~ 4421687 (+) |
| G197121 | NA | other | upstream | 269751 | 4371011 ~ 4371430 (+) |
| G197055 | NA | other | upstream | 491401 | 4149423 ~ 4149780 (+) |
| CI01000046_03943890_03945302 | ATP5J2 | other | upstream | 695681 | 3943794 ~ 3945500 (+) |
| G196936 | NA | other | upstream | 1446910 | 3186995 ~ 3194271 (+) |
| G197352 | NA | other | downstream | 630469 | 5259318 ~ 5276453 (+) |
| G197528 | NA | other | downstream | 1082208 | 5726121 ~ 5742684 (+) |
| CI01000046_06808895_06820945 | GSPT1, ERF3B, GSPT1L | other | downstream | 2176025 | 6808507 ~ 6821543 (+) |
