G197158


Basic Information

Item Value
gene id G197158
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 4648950 ~ 4708769 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU223845
TAATGTCTGTATAATTTCTGCCTGAAGTCTCACACCTATATGACCCTTCATCCTTCTTTCTGAGGTCAGAAATGAGCAGAGACAGATTTGCTGGAGAACTTTCATTAAACAGCTTCAGTCTGCCCTTGTAGTTTTCATCTTCAAAAACTTTAATCCATCCTGTTGTGTAATACCATGTGAATGACTTTACTGTAGATTGAGGGTCAGTACAGGAGCAGGGCAGCAGGACTGATCCACCTGTGTAACCTGTTACTTCTTCAGACTGTCCATGACTTGAAAGTCGACAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223845 True 288 lncRNA 0.42 3 4648950 4708769

Neighbor

gene id symbol gene type direction distance location
CI01000046_04615766_04638586 NA coding upstream 10008 4615766 ~ 4638942 (+)
CI01000046_04602081_04604842 CDK21 coding upstream 43329 4602081 ~ 4605621 (+)
CI01000046_04594068_04600391 RETSAT coding upstream 47962 4593711 ~ 4600988 (+)
CI01000046_04584213_04592141 NA coding upstream 56660 4583662 ~ 4592290 (+)
CI01000046_04579543_04581492 NA coding upstream 67410 4579281 ~ 4581540 (+)
CI01000046_04806234_04808207 NA coding downstream 96586 4805355 ~ 4808335 (+)
CI01000046_04811748_04819011 ZNF281A coding downstream 102841 4811610 ~ 4819368 (+)
CI01000046_04841558_04852685 NA coding downstream 132789 4841558 ~ 4853176 (+)
CI01000046_04861221_04879259 MPP3A, MPP3 coding downstream 152452 4861221 ~ 4880669 (+)
CI01000046_05279865_05281709 BAXA, BAX coding downstream 571096 5279865 ~ 5282127 (+)
G197153 NA non-coding upstream 5037 4641181 ~ 4643913 (+)
G196889 NA non-coding upstream 205068 4437237 ~ 4443882 (+)
G197140 NA non-coding upstream 212698 4435878 ~ 4436252 (+)
G197136 NA non-coding upstream 226991 4421736 ~ 4421959 (+)
G197135 NA non-coding upstream 235601 4412862 ~ 4413349 (+)
G197169 NA non-coding downstream 13420 4722189 ~ 4736190 (+)
G197170 NA non-coding downstream 27495 4736264 ~ 4744725 (+)
G197172 NA non-coding downstream 36093 4744862 ~ 4746106 (+)
G197173 NA non-coding downstream 49752 4758521 ~ 4758997 (+)
G197231 NA non-coding downstream 119035 4827804 ~ 4828132 (+)
G196869 NA other upstream 227263 4415530 ~ 4421687 (+)
G197121 NA other upstream 277520 4371011 ~ 4371430 (+)
G197055 NA other upstream 499170 4149423 ~ 4149780 (+)
CI01000046_03943890_03945302 ATP5J2 other upstream 703450 3943794 ~ 3945500 (+)
G196936 NA other upstream 1454679 3186995 ~ 3194271 (+)
G197352 NA other downstream 565613 5259318 ~ 5276453 (+)
G197528 NA other downstream 1017352 5726121 ~ 5742684 (+)
CI01000046_06808895_06820945 GSPT1, ERF3B, GSPT1L other downstream 2111169 6808507 ~ 6821543 (+)

Expression


Co-expression Network