G197466


Basic Information

Item Value
gene id G197466
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 5391122 ~ 5391352 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU224169
GATTTTTCAGGTCTGAATTTGAAAAGGCCTTGTTTGGTTATTTTTTTCCTTGTCACTACTCTTGGTAGCCTACAACTTGAAAAAAAAATCTGTTCAGCCTAAAATTTTCAATGAATAAACTTAGTTTAATTTAAGAGCAGTCTTTCCTGGTATCCAGCTTTTATGTTAACATACAGTACTTTCAAATTGTTGTTGACCTTGTACAATGTCCCGCAGTGACCTAAAATCTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU224169 True 231 lncRNA 0.33 1 5391122 5391352

Neighbor

gene id symbol gene type direction distance location
CI01000046_05335886_05341205 GPATCH8 coding upstream 49234 5335886 ~ 5341888 (+)
CI01000046_05315583_05316990 NA coding upstream 74033 5315185 ~ 5317089 (+)
CI01000046_05305482_05310465 NA coding upstream 80643 5305193 ~ 5310479 (+)
CI01000046_05279865_05281709 BAXA, BAX coding upstream 108995 5279865 ~ 5282127 (+)
CI01000046_04861221_04879259 MPP3A, MPP3 coding upstream 510453 4861221 ~ 4880669 (+)
CI01000046_05392316_05401559 ARF3A, ARF2B, ARF1L, ARF3, ARF2, ARF1, ARF3.S, ARF5, ARF2A, ARF5.L coding downstream 631 5391983 ~ 5402075 (+)
CI01000046_05481838_05537970 NA coding downstream 90486 5481838 ~ 5538151 (+)
CI01000046_05562155_05568637 MLX coding downstream 170605 5561957 ~ 5569463 (+)
CI01000046_05635252_05642052 DLX4A coding downstream 242419 5633771 ~ 5642292 (+)
CI01000046_05643458_05646109 DUSP3B coding downstream 252106 5643458 ~ 5646116 (+)
G197399 NA non-coding upstream 4406 5386470 ~ 5386716 (+)
G197383 NA non-coding upstream 6823 5381121 ~ 5384299 (+)
G197391 NA non-coding upstream 64924 5289001 ~ 5326198 (+)
G197372 NA non-coding upstream 96715 5291971 ~ 5294407 (+)
G197352 NA non-coding upstream 114669 5259318 ~ 5276453 (+)
G197386 NA non-coding downstream 40103 5431455 ~ 5769358 (+)
G197410 NA non-coding downstream 195829 5587181 ~ 5625506 (+)
G197417 NA non-coding downstream 264227 5655579 ~ 5665352 (+)
G197529 NA non-coding downstream 325004 5716356 ~ 5719969 (+)
G197355 NA non-coding downstream 352217 5743569 ~ 5746418 (+)
G196869 NA other upstream 969435 4415530 ~ 4421687 (+)
G197121 NA other upstream 1019692 4371011 ~ 4371430 (+)
G197055 NA other upstream 1241342 4149423 ~ 4149780 (+)
CI01000046_03943890_03945302 ATP5J2 other upstream 1445622 3943794 ~ 3945500 (+)
G197528 NA other downstream 334769 5726121 ~ 5742684 (+)
CI01000046_06808895_06820945 GSPT1, ERF3B, GSPT1L other downstream 1428586 6808507 ~ 6821543 (+)

Expression


Co-expression Network