XLOC_009430 (si:dkey-117a8.3)


Basic Information

Item Value
gene id XLOC_009430
gene name si:dkey-117a8.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 37682403 ~ 37683768 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018531
AAGATCAAGACTCGACTCTTTCCACTGCATTGACATCTCAAAACATGGAAAACAGCAGTTTTGGCCTTAAAAATGTGACTGGAAACTCAACAGACAAGAGCACTGTGGATAACAAGGGATTTGAGATTTTTCTGACCTGCATTTTCTCTGTAACCTCTGTAGTAGGTCTCATTGGAAATGGTCTGGTCATATTTCTGGCCGGCTGCAGAATGAAGACGACTGTCAACTCCATTTGGTTTCTGAATTTGGCGATTGCCgacttcatgttttttttactttcaatCACAAATGTTTCTCTAATCTGGAGCAATCAGCACAGTGTCTTCACAGGCGACTTTATCTTCATCGCAACACTTCTAAATGTGTTTGTTAGTGTTTGGTCTCTTGTAGTCATCAGTCTGGATCGATGCCTGTGCACATGGATGGCTGTTTGGGCTCAAAATAACAGAACTCTGCGTAAAGCCAGAATCATCTGCATCATCATCTGGGTTTCATCCATGGGCTTCATTTTACCTTACTTTAAAGTTTTTAAGATTGCAGGTTCAATTCTTGTAACATATGGATTTATAGTGGTCTTTCTCATCCCCTTCCTGATCATTGCATCTTCATACATCGCTATTGGAGTAAAAATCAATCGCCTCAAAAAGAGAAAGCAGCTCAGGTCATACAGACTCATTATAACTGTAATCTTAACTTTCTTCATCTGTTCATTTccacaacatgtttgctatttTTGTATGGTAATGCCAGAAAATATTAAATGGACTTTCACTTATCAATTTCATATGCTATTTCTTTTTACTCTCTACCTGGTTAATCTCAACAGCAGTCTGAACCCATTTCtctatgtgttcatgtgtgatgaTTATAAGAAGAAGCTGAAACAGTCTCTGGTGCTGGTGCTGGAGACAGCTTTTGCTGAAGATCATCTGGATATTAAAGAAATGAGACAGACACAAACGGATGAGCAAGAGACCAAAACCACACTTGAATTGCTAGAAATG

Function

symbol description
si:dkey-117a8.3 Predicted to enable G protein-coupled receptor activity and complement receptor activity. Predicted to be involved in several processes, including complement receptor mediated signaling pathway; phospholipase C-activating G protein-coupled receptor signaling pathway; and positive regulation of cytosolic calcium ion concentration. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000053928

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018531 True 1004 mRNA 0.39 2 37682403 37683768

Neighbor

gene id symbol gene type direction distance location
XLOC_009429 si:ch211-137j23.6 coding downstream 8283 37649268 ~ 37674120 (-)
XLOC_009428 si:ch211-137j23.7 coding downstream 36589 37639184 ~ 37645814 (-)
XLOC_009427 si:ch211-137j23.8 coding downstream 62236 37619004 ~ 37620167 (-)
XLOC_009426 si:dkey-42l23.9 coding downstream 71969 37608742 ~ 37610434 (-)
XLOC_009425 proser3 coding downstream 92803 37562582 ~ 37589600 (-)
XLOC_009431 si:dkey-117a8.1 coding upstream 23501 37707269 ~ 37719679 (-)
XLOC_009432 CR848836.1 coding upstream 44066 37727834 ~ 37729166 (-)
XLOC_009433 si:dkey-42l23.7 coding upstream 47287 37731055 ~ 37733875 (-)
XLOC_009434 si:dkey-42l23.6 coding upstream 57614 37741382 ~ 37743613 (-)
XLOC_009435 si:dkey-42l23.5 coding upstream 67345 37751113 ~ 37752236 (-)
XLOC_009422 CR848749.2 non-coding downstream 418138 37259354 ~ 37264265 (-)
XLOC_009420 AL953844.1 non-coding downstream 808037 36874251 ~ 36874366 (-)
XLOC_009419 NA non-coding downstream 897630 36784479 ~ 36784773 (-)
XLOC_009416 NA non-coding downstream 1179214 36500206 ~ 36503189 (-)
XLOC_009415 NA non-coding downstream 1244557 36421591 ~ 36437846 (-)
XLOC_009444 CR944667.3 non-coding upstream 192948 37876716 ~ 37880887 (-)
XLOC_009453 NA non-coding upstream 612389 38296157 ~ 38297734 (-)
XLOC_009455 NA non-coding upstream 741780 38425548 ~ 38425845 (-)
XLOC_009456 NA non-coding upstream 864059 38547827 ~ 38550804 (-)

Expression


Co-expression Network