CI01000047_00103238_00106878


Basic Information

Item Value
gene id CI01000047_00103238_00106878
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 102352 ~ 107028 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_00103238_00106878.mRNA
AGCCTTGAGCAGGGAAATCAGCCCCACTCCAGATCCAGTGCCCAGCTAGAACCCTCCGGTCGGAACAAAGCAGTTTGAGCCCATCACAGAATTCAAGCTCTTCTCCGCTGCGAGCCCACTCCGTCGAGGGCGTGTGTGCCCAACATCGCCATGGAGCCTGAGATGCTGAGATCACCCTCCCGTCTGACCAGGGAAATCAGCTCCACTCCAGATCAAGTGCCCAGCCAGAACCCTCCAGTCGGAACAAAGCAGTTTGAGCCCACCACAGAATTCGAGCTCTTCTCCGCTGCGAGCCCACGCCGTCGAGGGTTTGTGTGCACAACATTGCCATCCTCCCTGAGATCACCCTCCTGTCTGACCAGGTGCGCTTTCGTGGAATCGGAGGGCAAAGACGAGAGCCCCGCTCACCCTCCTGCCACTGAGAGCATAACACTGGCAGCACCACTTTCAGCTCTTCAATCAGACGATTCTTCTTTGGTCCCGTCAGTCCCACCCTGCCTCCCTCTCCCTTCACCTCATCAAATCATCTTAAAGGACTTAGTCCTCATCATTGGCCGTCACATGACAGATCTGCTGTTCACAGAAAAAGACCTGGTGACATCACTGAAAGATTACATCAAAGCAGAGGAAAGCAAACTGGAGCAAGTGAAACAGTGAGTAATACCTATTAACAGTATCAACAGGAGCCGTACTATTACTTTACAATTATGTTTGTCAGTAAAATCTGACAATATTTATGGAAATGATACATCAGTATGGATCAATGCATCAATCAAATGACTAACAATATGATGTATCCGTCACATATTCAGTTATGTTTGTTTTTGTTTCGTTTTCATGGACTTTTAGTTTGGTATTTGGTAGTTCCTATGTTCCTTTGTTTCTGTTTCCCGCTTCTCATTTGTTGTCATGGACATTCATTTATCATCACAGGTGTTATTCATTAGTTCCCTCATTTGCCCTGTATTTAAGTTGCTCTGTCTCAATCTTTAGTTGACGGCTGTTGTTTGTGTTTGTGTTTTACTCACGCTGTTATGCCTTATTGCCCTTTGTGTTTATAAACCTTGTTGCTATTCTTATATCCAGTCATCAGTCTTCAGCCTTTAGTCAACGTGACAGTAAAATCAATATAGATTTTTAAAGTGCACCTTTATTTTGACACTCCCTTGTTAGCCACATCTGCACAAAATGTCTGTCGACATTTATTTTTTAAATTTCTTTTTAAAATTACTATTTACTATATAAATGTATTTCTCTCATTTTGTTGTGTCCCTATGTGGATACTAGATTTGCACACAGAACACTGAAAGCCATTTAGACTGTTGTCCCATTGCACAAGCCAATTATGAGCTGTCATCAGATGATTAATGATGATTAATGTAAAAAAGGATCATAATGTCGTAATATCGATATATCAACCACAGGCCTCTGAATCTAATCAAATCATTATCGTATTGTGCTATGTTTTGAGGTATTGGCAAATATGGATGTCAGATCGTATTGTGATGAAACGTTTCATTTACACCTCTAGTGATCTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_00103238_00106878.mRNA True 1543 mRNA 0.42 3 102352 107028

Neighbor

gene id symbol gene type direction distance location
CI01000047_00099711_00100984 NA coding downstream 1368 99652 ~ 100984 (-)
CI01000047_00082013_00099032 NA coding downstream 3146 81600 ~ 99206 (-)
CI01000047_00010948_00034205 PPP1R9BB coding downstream 67856 10633 ~ 34496 (-)
CI01000047_00124354_00130228 DNAJC9 coding upstream 16975 124003 ~ 130386 (-)
CI01000047_00160239_00163260 NA coding upstream 51796 158824 ~ 163280 (-)
CI01000047_00209567_00227765 NA coding upstream 102469 209497 ~ 227765 (-)
CI01000047_00235688_00240415 TACO1 coding upstream 128488 235516 ~ 240769 (-)
CI01000047_00347663_00378777 NGFRB coding upstream 239705 346733 ~ 378777 (-)
G200247 NA non-coding downstream 30244 71907 ~ 72108 (-)
G200262 NA non-coding upstream 49179 156207 ~ 257270 (-)
G200279 NA non-coding upstream 104073 211101 ~ 211368 (-)
G200293 NA non-coding upstream 152938 259966 ~ 260170 (-)
G200298 NA non-coding upstream 160152 267180 ~ 267426 (-)
G200309 NA non-coding upstream 179930 286958 ~ 287477 (-)
G200299 NA other upstream 160502 267530 ~ 268035 (-)
CI01000047_00519408_00522108 PYYB other upstream 412080 519108 ~ 522245 (-)
G200472 NA other upstream 726913 833941 ~ 834471 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 other upstream 1599040 1706068 ~ 1744282 (-)
G202733 NA other upstream 3025285 3132313 ~ 3133652 (-)

Expression


Co-expression Network