CI01000047_00124354_00130228 (DNAJC9)


Basic Information

Item Value
gene id CI01000047_00124354_00130228
gene name DNAJC9
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 124003 ~ 130386 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_00124354_00130228.mRNA
AAAACTATTTCAAAAAATTTAAGGATAAGGTTTTTATGATAATGAGAAACAAATTCAGTCAAATGTGTCACGTTAAAATAAGACTCATGCATTTTTTTGTATATATTTGTAGTTAGCATGTCAGTGGGTGATTTTTTTTTTTTTCTTCTCTCACAGTCATGGGTTTACTGGATCAGTGTGAGGAGCTCTTCAAGACCTCTAATCTGTATGAAGTTCTGGGTGTTTGCAAAGAAGCGTCTGACTCCGAGATCAGACGTGGCTATTATAAAGTCTCTCTGCAGGTTCATCCAGATAGAGCTCCTGGTGATGAGTCAGCCACCACCAAGTTTCAGGTCCTGGGAAAGGTGTATGCAGTGTTGGCTGACAAGGACCAAAGGGCGGTCTATGATGAACAGGGAATAGTGGACGAAGAGTCAGACTCCCTCGATCAAGATCGCAATTGGGAGGAGCACTGGAGAAGACTGTTTCCCAAGATCACATTGCAAGACATCTTGGACTTTGAGAAGCAGTATAAAGGCTCTGAAGAAGAGGTAGAAGACTTAAAGAGACTGTACCTACAACATGAAGGTGACATGGATCTGATCATGGAGTCCGCCTTGTGCTGTACTTACGAAGATGAGCCACGTGTCAGAGACATACTACAGAAAGCCATTGAAGCTGAAGAGGTGCCAGCCTACGAAGTCTTCACTCACGAGAGTGTCAAAAAGAAGAACAACCGCAAAAGAAAGGCTGAAAAAGAACGTAAGGAGGCAGAGGAAATGCAGAAGGAGATGGGCTTGAACAGTGAGGACAGCCTGGTAGCTATGATAAAGCAAAGACAAAAGTCCAAAGAAAATGGATTCAACTCTCTCATCTCAGATCTGGAGGCTAAATATTGCAAGAAACCAGCAGCAGGAAAGAAGGGCAAGAAAAAGTAAAGTTTCACCAGACTTGCCTATTTCTATCAAATGTTATCATTCATCTTGTAATCTACTCTAGAAATGTAAATAATAATCAAAGGACACTTTATAATGGATACTCACCCTTTGTTAGCCATACGACACCTGCATATTGAGACTAATAACAGGTACCACACTCTCATCCATTTATTACAGTGCATTAGTGTGAATCTGCTCCATGTGTTCATGCTCATACCAGCTTGTGAATCAAATGAAAATGTAAGATTTTAAGTGTTACTGTAACATTTTTTTGTATATATGTTTTCCCGTTTCCTGGTTTTGTAGTGTTGGATGTATTATTGTTCGAGTAGATCATTTGATTATAATAAA

Function

symbol description
dnajc9 Predicted to enable heat shock protein binding activity. Predicted to be active in cytoplasm and nucleus. Is expressed in central nervous system; corneal epithelial cell; head; and immature eye. Orthologous to human DNAJC9 (DnaJ heat shock protein family (Hsp40) member C9).

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG:

id description
K09529 DNAJC9; DnaJ homolog subfamily C member 9

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_00124354_00130228.mRNA True 1268 mRNA 0.40 5 124003 130386

Neighbor

gene id symbol gene type direction distance location
CI01000047_00103238_00106878 NA coding downstream 16975 102352 ~ 107028 (-)
CI01000047_00099711_00100984 NA coding downstream 23019 99652 ~ 100984 (-)
CI01000047_00082013_00099032 NA coding downstream 24797 81600 ~ 99206 (-)
CI01000047_00010948_00034205 PPP1R9BB coding downstream 89507 10633 ~ 34496 (-)
CI01000047_00160239_00163260 NA coding upstream 28438 158824 ~ 163280 (-)
CI01000047_00209567_00227765 NA coding upstream 79111 209497 ~ 227765 (-)
CI01000047_00235688_00240415 TACO1 coding upstream 105130 235516 ~ 240769 (-)
CI01000047_00347663_00378777 NGFRB coding upstream 216347 346733 ~ 378777 (-)
CI01000047_00468782_00483200 MPP2B, MPP2 coding upstream 338022 468408 ~ 483200 (-)
G200216 NA non-coding downstream 2856 78005 ~ 121147 (-)
G200247 NA non-coding downstream 51895 71907 ~ 72108 (-)
G200262 NA non-coding upstream 25821 156207 ~ 257270 (-)
G200279 NA non-coding upstream 80715 211101 ~ 211368 (-)
G200293 NA non-coding upstream 129580 259966 ~ 260170 (-)
G200298 NA non-coding upstream 136794 267180 ~ 267426 (-)
G200309 NA non-coding upstream 156572 286958 ~ 287477 (-)
G200299 NA other upstream 137144 267530 ~ 268035 (-)
CI01000047_00519408_00522108 PYYB other upstream 388722 519108 ~ 522245 (-)
G200472 NA other upstream 703555 833941 ~ 834471 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 other upstream 1575682 1706068 ~ 1744282 (-)
G202733 NA other upstream 3001927 3132313 ~ 3133652 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location