CI01000047_00160239_00163260


Basic Information

Item Value
gene id CI01000047_00160239_00163260
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 158824 ~ 163280 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_00160239_00163260.mRNA
AGTTTTTTTATGTTAACACTATGCATTTCTACTTGCAGTGGCTACTTTTCTCAAAAGTCAATAGACTTGGGGAAAATTCCAGAGAATGGTATGTGTTGCCAAAAGTGGTCTTTTTTTCTCACATTGATAGGGCTATTGTGGCATCTGACACTCCTCATAGACCCCACCTTGACTCTATGTTTACATGTGCTTCCAACACATATTTCCAAGATCAGCTTGCCACTAAATTTTTTGAGCTTCAGGACAAGCCAGTAGGATCTACGGTGGCTGGTGGTTCTGACCTTCACCTATGGATTCCTATGCTATGCCTGCATGTAAAGACTTCATGGCAGAATTTTGCCCTCAAAGGACCAGGTATGGCCAAAAGGCGTTCCAAGACCTCTCGCACTTTGGCTTCAAAGGCAGAAGCAAAGTCCATTGGAGTGTGGAGTGTACCTGAAGTCAAACAGCCAGTTGCTGCACTGGTGGTGTCACCAGATGAGGCACTGTGGGGGAATGTCCGATGCCCTAGTGTTCAGTGTGGCCGCACAGATTCCTTTCTAACGAAAGCGTATGAGTCAGTTGCCTACATCACTTGGGCTGACAACACTGTCGGCCAATTAATTTGGGCTACTTTTAACTCTTTAAAGTCTGTCATTTTTCGCTGGCCCCCAAGAGGGCACAAAGTCGGAGAGCTTGTTGTGGCTCACTCACAATATCCTCACCTGGTCACTTCCACGGTTTGCATCACTGAGGGCTGTTTATTTACCAGGGGTAGTCAATCAGACTGCAGGAGCTCTGTCCAGGAATTGGATACATCCAAGCGAGTGGAGGCTCCACCTGGATGTAGTGCAGGACATATGGCAGGAGTTCGGTATGGCAGACGTAGATCTATTTGCTTCAGAAAACACAACTCTCTGCCCATTGTGGTTTGCCCAGATGGAAGAGTCCAGTCCATTGGGGCAGGACGCACTGTCACAAGATTAGTCAGATTGTCTTCTGTATGCTTTTCCTCCGATTCATCTGTTGTGGGAGACACTTCACAGCATTGCTCAAGGCTGACACAGGGTACTTGTGATAGCGCCAAAGTGGCTGTCCAAACCACGGTTTCCCTTGCTCCAAACCTTGTTGGTGGGGAGACCAAAGCAGCTTCCTTTCAGGAGGGATCTGCTATCCTAGCTGGACAGTCATATTTGGCATCCAGATCCAGTCCATCTACAGTCACGGGTCTGGCCTCTGGGGCCAACGCTGAAACTTCATCATTCACACTTCTCTTAATGTGAGGGCTGCTTCTACACAAAGGCTTTATACCTATCAATGAAGTCTTTCTGTTTGTAGTGCAAGACACATGATTTTGACCCTGTACAATGTACAGTTTCTGTAGTTTTGAGCATCCTGAAAGGTCTTTTAGACAGCGGCAAATCAGCCTCCATGTTAAAGGTTTATGTGGCAGCCATTTCTGCACATCATTCACCTGTACAAAGTTTTTCTCTGGGCTTCCACAGCTTAGTTTGCAGTTTTTTAAAGGTGCAAGGCACCTCAATCCTGCTCACTTCAATTCTGCTAGTCCCCTCTTTCTCCAGTGTGGAAGTTACCTCTGGTGTTGGAGTCTCTTTGTCAATCTCCTTTTGAACCTTTTGAGGACACAGATCTTAGGTGGAAGTCCTCAAAGGTAGCCTTCCTTCAAGCTGTGGCTTCCACAAAAAGGGTTGGTGAACTTCATGTTCTATCTGTGAGTCAGTCCTGTAGAGATGGAAACCAGAAAGTACTGGTGTTATCCTTTGGCCCAATCCATCTTTCCTCCCTAAGGTGCTACTGCACCAGTTATTAATCAGTCTATTGAACTGTATTCCTTCCAACCAACAGTTCTTGAACAACATTCTCTGCTCTTGTGCCTTGTGTGAGCTTTGAAAATGTATGTAGAAGCTACAGCGCTGATAAGGCAATCAGAGCAGTTGTTTGTCTGTTATAGGGGAGCTAGGAAAGGTGCCCCTCTATCTAAGCAGAGGCTGTCACAATGGGTTGTTGAGGTTATTGCTTTGGCCTACAAGAAGTCTCTGCAACCCGTGCCTGGGACCATGACTTGCCATTCCACTAGGGCTGTTTCCTCTTCATGGGTGGCATTTAACTTACAGGCATCTGTGCGGCAGTGACATGGTCCTCTCCTTGTAAATTTGCGAGATTCTACAACGTCAACGTTGCTGTTTCTCAGGATGTGAGCTTGGCTGTGCTTTGCTACTAATCCTTTTTCTGGCAAGTTATTTTCCTCATGACCCTGTTGGTATGGGTCATCCACTAATATAACATAGTCTCTGGCGGTCAGGAGGAATGAAACAGAATACTGGTTACGCAGGTAACCATGGTTCTATGAATTCCAGATGACCGCCAGAATTCCCTGTCGCTCGGAATGCGAGAGGCGCTTCGAAGTGCGGCGCTAAGCTGCACTGGCTTACATCCCCTCGGATCAGCTCACGTCACTACATGATTTCGTTGGTATATGTTTTTCGACCTGTCTGGCAGGTGCACTAATCCACTAATATGACAATCCGGAATTTACAGAACCACGGCTATGATATGAAACACCTATTATATTGTGTGTTACACCTTAGCATCCATAGGACCAACTACTATCTTTAGTTTACACACTATATGAATTTGCTAAGTAAAATGACTTAACAAAACAAAAACATTTAATAAA

Function

NR:

description
lambda-recombinase-like protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_00160239_00163260.mRNA True 2677 mRNA 0.46 4 158824 163280

Neighbor

gene id symbol gene type direction distance location
CI01000047_00124354_00130228 DNAJC9 coding downstream 28438 124003 ~ 130386 (-)
CI01000047_00103238_00106878 NA coding downstream 51796 102352 ~ 107028 (-)
CI01000047_00099711_00100984 NA coding downstream 57840 99652 ~ 100984 (-)
CI01000047_00082013_00099032 NA coding downstream 59618 81600 ~ 99206 (-)
CI01000047_00010948_00034205 PPP1R9BB coding downstream 124328 10633 ~ 34496 (-)
CI01000047_00209567_00227765 NA coding upstream 46217 209497 ~ 227765 (-)
CI01000047_00235688_00240415 TACO1 coding upstream 72236 235516 ~ 240769 (-)
CI01000047_00347663_00378777 NGFRB coding upstream 183453 346733 ~ 378777 (-)
CI01000047_00468782_00483200 MPP2B, MPP2 coding upstream 305128 468408 ~ 483200 (-)
CI01000047_00519408_00522108 PYYB coding upstream 356009 519108 ~ 522245 (-)
G200216 NA non-coding downstream 37677 78005 ~ 121147 (-)
G200247 NA non-coding downstream 86716 71907 ~ 72108 (-)
G200279 NA non-coding upstream 47821 211101 ~ 211368 (-)
G200293 NA non-coding upstream 96686 259966 ~ 260170 (-)
G200298 NA non-coding upstream 103900 267180 ~ 267426 (-)
G200309 NA non-coding upstream 123678 286958 ~ 287477 (-)
G200310 NA non-coding upstream 124426 287706 ~ 288141 (-)
G200299 NA other upstream 104250 267530 ~ 268035 (-)
G200472 NA other upstream 670661 833941 ~ 834471 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 other upstream 1542788 1706068 ~ 1744282 (-)
G202733 NA other upstream 2969033 3132313 ~ 3133652 (-)

Expression


Co-expression Network