CI01000047_00620874_00645283


Basic Information

Item Value
gene id CI01000047_00620874_00645283
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 620756 ~ 645283 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_00620874_00645283.mRNA
TTCCAGCTACTCCTCTTTAGCACTCGACTTTGAGAGAGAGCTCAGGATTGGGCCTGTCTACGAGTCACCCAGGATGTCCAGACGCAGTCTCCGTCTGCACACCAACACAAGTCACTATGGAGATGACAGTCTGCTTGACTCGTCACTCCACCACAGCGCCACATTCAGCCGTGATACAACTCTGAAGAGCAGAAGAGCTCATCACTCTGTTTCAGGGTCAACACAGATTGTTCAAACACCGAGATCTGCCTCAACGTCAGTCCTGCAGGCTCATAACAGCACCCTCAACAGCTGTGCGCCCAGTGATGCCTCTCTGCTGTCCTCTCTGCTAGATGAGTCCTCCATACAGGAACACACCCTAGTTGACAGCTTCTGGGGTTTGGATGAAGACTGTGATATCAAAGACCAAACTATCATTGCACACCACAGCACAGTGGAGGCCAAAACACAGACTTCTACAGCACAGAACGGCTACGTCTGCAAAGACTGCACCATCACCTCTCCTTCCAAGAACAACATTTCCCTTCATAATGCTACTGGGCATCAGGTGTCTTTTACAGAGGCAGCCAGCACAGCTTCCTTTCCAAACACTACATTGTACTGCAGGGACAAGAATCGCAGACACAAGCCAGGGTTACTGGGGATGTTGTCTGAGATGTGCCTTCATTACAGCAGGAGAATTGCTGCATTTGTAGTGTACATATGCACACTGCTGATGCAGACGGCTCTACTCAAAGGCATGCTGTTATCAGTGTTGCACTGGTTTGTGCGAGTGTGTAAGGGAGTTGCTCGCTCCACAGCCACTGTGCTGAAGAAGACATTGCATTCTGTGCAGCAGAAGAGAGCCACCAATGGCTGTGCTAACGGAGGCAATGAGAAGTACTACAGCAGTATGAGTGTTAAAGAGGTAGTGCTGCAAAAGGAACGGCCAAAGTTCAGCGGCATACTGTGTAAGTTGTTGGCAGGGCAGTTTGTTCCCCAGCAGTTCCAGCAGTCCCCCTGTTTTGCTCTCAGGAAGTTGTGGGTTGTGTCCTTAAGTGCTGTAACCCCCTTCAATCCCTTTGCTGTTTTTAGGTGGAGTGTCTTTTCTTGTCAGGCTGGTTGTTGCCTCGGAGGACAACCTCAGAAAGCTTCTTGTGGCTTTACAATTTCTTTGCAAACTCTGTGCTACTGGGGGCCCTCCGGACTTTTGGCCATGATGCCTGCTGCTAATGTGATGGATTGGAGGGACACATCCTATCTCACCCCTCCGACCATGGACGACTCGGAGAACGGACAAACTCTTACCGACACAGACTCTCAGAGGCCCTCGGTGCTGTCGATGGCGTCGGTAGAGGCAGAGAGGCTGATACGTTTGGAGGAGAGCTTGTCTCAGCTGTGGGATCGAGTGGCAGGAGGTTTGCTCAGGCAGGAAGAGCAGCACACTGAAGTGCTCAGTCTGTATAACACGCTACATTCTGAGCTTCACAGACACACGGACAGAGAGAGCCTGGGCCAGTGGATAGGAGACCTGCTGGAGGAGAGATTCAGCCTGATGAAGGGAGAGGTGCAGAAAGAGGCCAAGAACACGCAGCAGCGTCAGGAAAAGCATGCAGAAGAGCGTCAGTCAGAGAACACTCGACTCGCTGAAGCTGAGGCTCTGCTCCAGACGTTAGCGCGCAAAACTGAGGAGCTGCAGAGAAAACACGAGCCCGCATTTAGAAAGATTCATGAGGCTGAGGCACCCACCCCTGATCCTCACAGTGAGGAGGATGAAAGCAGTGCCAGTGAGGTTTTGCTGGCAGAGGTGAGGCGGCTAGAGGAGGCTTTGGAGCGCATCAGAGATGATGTGCAGGGGCTGATGGGATGCAGAGACAAATGTGACCAGCTGGCCTCCTTTTCAAGCTCAGTGTCCGAGCAGGTGGAAAGGGAAATCAAGTCTCTGTTTTACGGCAGTGACAGAGCAGAAGAGCTGGAGCTTCCTGAATCTCTCCTGCAGTGGCTCTCTGATCACTTTGTGAGCACCACTGAACTGCAGGCTTCACTCAGCGTGCTGGAGAGCAGCATTCTGGGTAACCTGTCCCTTCAGGTAGAGGAGGGCCAGTCACCTTCTAAAGAGACAATCACCCGGACTGTACTACATGCCACAGGGGAGGCAGGCCTCTCTGAGGAACATGTACAGTTGATTGTCAACAATGCAATGAAGCTCTACTCTGAAGACCGCACTGGTCTGGTGGACTATGCTTTGGAATCTGGAGGTGGCAGCATCATAAGCACTCGTTGTTCAGAGTCCTTCAACACCAAAACGGCACTGCTGAGTCTGTTTGGCCTCCCGCTGTGGTACTTCTCCCAGTCACCACGTGTCGTCATACAGCCAGACGTGCATCCTGGGAACTGCTGGGCATTTAAAGGTTCATATGGTTATCTGGTGATCGGCTTGTCCATGAAGATTGTGCCTACAGCCTTTTCTCTGGATCATGTGCCCAAATCCCTGTCACCCACCGGCAACATTAGCAGTGCCCCTCGAGACTTCAATGTCTATGGTCTTGATGAGCAGCAGGAAGAGGGGCAGTTGCTCGGACAGTTTGTCTACGAAGAAGATGGAGACGCTCTTCAGACCTTCTTGGTCTCTGAGGAGATCACACAAGCTTTTCAGATCATTGAGATGAGAGTGCTGTCTAACTGGGGTCATCCTGAATACACCTGTGTGTATCGTTTCCGGGTGCACGGGAAGGTTGTTGATGAATGACTTGCAAGCACTTGGGACATTATGAACTCCTGACAATTTGTCACTCGTGCACTGGACAAAAAGGAATGGAGTCGGTTGAGAAACAAATAATGTGCCATAGAGCTATACTGGTAATATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_00620874_00645283.mRNA True 2846 mRNA 0.51 21 620756 645283

Neighbor

gene id symbol gene type direction distance location
CI01000047_00611745_00618340 RAC2, RAC3, RAC3A, RAC1, RAC1A, RAC1B, RAC3.S, RAC3B, RAC1.L coding downstream 2416 610742 ~ 618340 (-)
CI01000047_00590846_00598816 UQCRC2B coding downstream 21940 590645 ~ 598816 (-)
CI01000047_00558772_00579870 NA coding downstream 40051 558052 ~ 580705 (-)
CI01000047_00546330_00551551 NA coding downstream 69205 545956 ~ 551551 (-)
CI01000047_00532901_00545479 NDC80 coding downstream 75277 531554 ~ 545479 (-)
CI01000047_00654212_00689092 MYOF coding upstream 8165 653448 ~ 689092 (-)
CI01000047_00701972_00715090 GCP2, TUBGCP2 coding upstream 56689 701972 ~ 715090 (-)
CI01000047_00884469_00889027 NA coding upstream 238415 883698 ~ 889027 (-)
CI01000047_00892063_00896561 NA coding upstream 245350 890633 ~ 896561 (-)
CI01000047_01071329_01073839 NRBF2B, NRBF2 coding upstream 425019 1070302 ~ 1073839 (-)
G200404 NA non-coding downstream 89701 530604 ~ 531055 (-)
G200387 NA non-coding downstream 155673 464750 ~ 465083 (-)
G200376 NA non-coding downstream 157665 461430 ~ 463091 (-)
G200372 NA non-coding downstream 161584 458920 ~ 459172 (-)
G200332 NA non-coding downstream 279276 341154 ~ 341480 (-)
G200440 NA non-coding upstream 125220 770503 ~ 770964 (-)
G200457 NA non-coding upstream 134165 779448 ~ 801732 (-)
G200459 NA non-coding upstream 135187 780470 ~ 782343 (-)
G200462 NA non-coding upstream 142091 787374 ~ 787712 (-)
G200468 NA non-coding upstream 170044 815327 ~ 816315 (-)
CI01000047_00519408_00522108 PYYB other downstream 98514 519108 ~ 522245 (-)
G200299 NA other downstream 352721 267530 ~ 268035 (-)
G200472 NA other upstream 188658 833941 ~ 834471 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 other upstream 1060785 1706068 ~ 1744282 (-)
G202733 NA other upstream 2487030 3132313 ~ 3133652 (-)
G202944 NA other upstream 3152520 3985342 ~ 3986402 (-)
CI01000047_04213574_04213976 NA other upstream 3568126 4213409 ~ 4214085 (-)

Expression


Co-expression Network