CI01000047_00892063_00896561


Basic Information

Item Value
gene id CI01000047_00892063_00896561
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 890633 ~ 896561 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_00892063_00896561.mRNA
GTGCGATGGATGATGTACTGGATTGTCTTTGCCCTGTTTACAGTAGTGGAGACGGTCACAGATCTAACCATAGCCTGGTTTCCCCTCTATTACGAGATCAAGGTTGCGTTTGTGATCTGGCTTCTGTCTCCCTACACGAGAGGAGCTAGTGTCATTTACAGAAAAGCCCTCCATCCTCTGCTTTCCTCCAAAGAAAGGGAAATTGACGACTACATAGTCCAGGCGAAAGAGCGAAGCTACGAGACCATGGTGAACTTTGGCAAGCAGGGCCTGAGCATTGCTGCAACTGCTGCTGTGTCTGCTGCTGTCAAGGCAAGTCAAAGAGCACAACTGCACTGGCACATACTTGCAATACCAGCAATAAATGAAACACTAATGACTTTCATTTGCAAGCAAAGGAATACTGCAGCCCTGCTCTCTCCAGTGCAGGGTCAAGGTGCCATCACAGAGAAGCTCAGGAGTCTCAGCATGCACGACCTTACCCAGATCCCTCAAGATGGCGGGTATTCATCCTACGGCTCCAACCCAGCCAGAAGAGCCATCATGGACCAACCCGATGGAGCTGGTATATCTTACCTTTCAGATTAATTATTAACATGCCATCCTTTGTTTCCTTTCGCACTGCTGTTTCTCTGCTGCGTCCACAACAGAAGGCAGATGCCTTGCTCTGTTTGTTCAGTCACAAACTTAGCAGAGCATTTTTATGAACCTACTTGGTTTCAAACAAGCTTCCAATTAGGGCTGCACAATTAATCAAATTTCTAATCGTGATTACGATGCCTTACGATCATTCAAAGATACGATTGCAACAAAAAATATCCACTTACATTGTTCTGTGTGTTTAAGAGATGTGTTTAGAGCATGTTGTGAGAGGCGAATCACAACTGCTTCAGAGTGTAAAAGGTCTAACCCAGCTCAAAAGGAACTACCAGTGAGGTAAGTGTATGCTGATTGGTTGAACAAACGCGAAACACCAGCACCCGCCATTTTTAAAAAGCTGTGAACACAGCCTATCTATTTAGTCCATGAAATAACTCTACAAACATGGAAAACCGTGATAGGTGGACCTCTCAACCTTACGCTAAGGAGAAAATCCAGCGTGACTTTGAGCAGACCCAGCAAAACATGATTATGTATTACTGCTCAGCTAGCGACATTGGACATCAACCACATGGCTAAAGCTAGTACTTATTCATTTACTGTCTACTTTCTTTGTGTAACAGTTCTATCTAAGAACGTATTGGACAGGACTGTTAAACATATCTTAAATTAATGAAGACGGAGAATGCGAGCGCTGTGTGCTCTGGCTGAGCTGTTCTCAGCGCCATCAAAATAAAAGTCACAAGCAGCACAGTTTGTCACTTCAGAGTTCCTACTGGCGTTGCTAATGCAACCAGGAAAATGGACCTAGGGGAACCACCCTGGTGGCTAAAACTTAAGCCCCTTTTATTATTATTAAGAAACCAAACCAACGTATAGTTGACATTTGAGGCTTAGTGCTATAGAAAAGCAATAAATAATTCTCAGGAAGAGTGTTTTCAGCTTGTTTTTGTTTGTTTTGTTTTTTACATAAAAATACGGCATGCAGTTGCTTCAAACAATGGTATAAAGCTATTCAAAACATCATTCAATGTAATTGTGATAATCTTAATTAATTATCGCAATTTCAAGGGAATAATCGACAGCCCTATTTCCAATGCATTACGACGTCACGTCTAATGATGTCGGACAAATTCAAGTGAGAGGGGATCACATAAATATTTAATCACAATAATTCTTATTTCTCATTATCAGTAAAGATGAAAACACTAGACAGTTATGAAATAACTACTCCATCAGTGAAGGATACATCAATGCCGCCTTCATAAACCAGATGAAACCATCTTAGTAGACAGGATGTTACGCAAACATTGAATTTGAATGTGCTTTGATGTCGCCTTCGAGGTTTCAGACACAGCCTTTGTGTGACACTAAACACAGCTAGCAAGAGCCGGGAAAGCGCCTGTCGCGCAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_00892063_00896561.mRNA True 2018 mRNA 0.42 6 890633 896561

Neighbor

gene id symbol gene type direction distance location
CI01000047_00884469_00889027 NA coding downstream 1606 883698 ~ 889027 (-)
CI01000047_00701972_00715090 GCP2, TUBGCP2 coding downstream 175543 701972 ~ 715090 (-)
CI01000047_00654212_00689092 MYOF coding downstream 201541 653448 ~ 689092 (-)
CI01000047_00620874_00645283 NA coding downstream 245350 620756 ~ 645283 (-)
CI01000047_00611745_00618340 RAC2, RAC3, RAC3A, RAC1, RAC1A, RAC1B, RAC3.S, RAC3B, RAC1.L coding downstream 272293 610742 ~ 618340 (-)
CI01000047_01071329_01073839 NRBF2B, NRBF2 coding upstream 173741 1070302 ~ 1073839 (-)
CI01000047_01119401_01120162 ADOA coding upstream 222591 1119152 ~ 1120233 (-)
CI01000047_01175229_01292056 ARID5B coding upstream 278027 1174588 ~ 1292056 (-)
CI01000047_01337067_01353593 NA coding upstream 440408 1336969 ~ 1353593 (-)
CI01000047_01373782_01374697 NA coding upstream 477221 1373782 ~ 1374854 (-)
G200479 NA non-coding downstream 42566 847843 ~ 848067 (-)
G200471 NA non-coding downstream 56766 833510 ~ 833867 (-)
G200470 NA non-coding downstream 57176 833186 ~ 833457 (-)
G200469 NA non-coding downstream 73555 816609 ~ 817078 (-)
G200468 NA non-coding downstream 74318 815327 ~ 816315 (-)
G200607 NA non-coding upstream 195323 1091884 ~ 1092263 (-)
G200609 NA non-coding upstream 201100 1097661 ~ 1097894 (-)
G200626 NA non-coding upstream 237584 1134145 ~ 1142557 (-)
G200652 NA non-coding upstream 426936 1323497 ~ 1323757 (-)
G200657 NA non-coding upstream 430833 1327394 ~ 1327615 (-)
G200472 NA other downstream 56162 833941 ~ 834471 (-)
CI01000047_00519408_00522108 PYYB other downstream 368391 519108 ~ 522245 (-)
G200299 NA other downstream 622598 267530 ~ 268035 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 other upstream 809507 1706068 ~ 1744282 (-)
G202733 NA other upstream 2235752 3132313 ~ 3133652 (-)
G202944 NA other upstream 2901242 3985342 ~ 3986402 (-)
CI01000047_04213574_04213976 NA other upstream 3316848 4213409 ~ 4214085 (-)
CI01000047_04285605_04286644 COA3A other upstream 3382347 4285227 ~ 4286694 (-)

Expression


Co-expression Network